Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03353 and BPUM_1984
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_03353___ypjA.1.24716.seq
# -bsequence pep-align/BPUM_1984___ypjA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03353___ypjA-BPUM_1984___ypjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03353___ypjA-BPUM_1984___ypjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03353___ypjA
# 2: BPUM_1984___ypjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 137/197 (69.5%)
# Similarity: 154/197 (78.2%)
# Gaps: 12/197 ( 6.1%)
# Score: 741.0
#
#
#=======================================
BSNT_03353___ 1 MKWFQYVLGQRPMLILVLAINFLGTVYGYYWYLPQLLETPARFLIFVPDS 50
||:|:|.|||||||||||||:|||:||||.||.|||||
BPUM_1984___y 1 ------------MLVLILIINFLGTVYGYYWYIPQLVETPAIFLAFVPDS 38
BSNT_03353___ 51 PTATFFFLFVLLAFLMKRNAPLFEALALVTLVKYGLWAVAMNFLVLAVTG 100
|||:|||||||||||||||||.|||||||||:|||||||.||..||....
BPUM_1984___y 39 PTASFFFLFVLLAFLMKRNAPYFEALALVTLIKYGLWAVGMNIFVLLSVD 88
BSNT_03353___ 101 DLPWEGYMLIASHFAMAVQGVLYSPYFRFSFWHLAIAAVWTLHNDVIDYL 150
|.||||||||.||||||||.||::||:||...||.:|.:|.||||||||:
BPUM_1984___y 89 DFPWEGYMLIGSHFAMAVQAVLFAPYYRFKMRHLVVAGIWILHNDVIDYV 138
BSNT_03353___ 151 FDMMPRYSMLSDYMTEIGYGTFWLSIFSIALAYFLVVSKKQTKLELM 197
|.|||||||||.|..||||.||||||..:.::|:||:|||..||||.
BPUM_1984___y 139 FGMMPRYSMLSAYTNEIGYVTFWLSIAVLLVSYYLVLSKKSIKLELP 185
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