Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03346 and BPUM_1978
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_03346___ypjG.1.24716.seq
# -bsequence pep-align/BPUM_1978___ypjG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03346___ypjG-BPUM_1978___ypjG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03346___ypjG-BPUM_1978___ypjG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03346___ypjG
# 2: BPUM_1978___ypjG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 150/236 (63.6%)
# Similarity: 187/236 (79.2%)
# Gaps: 2/236 ( 0.8%)
# Score: 805.0
#
#
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BSNT_03346___ 1 MYNADVLAFGAHSDDVEIGMGGTIAKFVKQGKKVMICDLTEAELSSNGTV 50
|...|:||||||||||||||||||||:||:|.:|.|||||:|||||||||
BPUM_1978___y 1 MKRLDILAFGAHSDDVEIGMGGTIAKYVKKGARVGICDLTQAELSSNGTV 50
BSNT_03346___ 51 SLRKEEAAEAARILGADKRIQLTLPDRGLIMSDQAIRSIVTVIRTCRPKA 100
..|:|||..||.|||...|||||||||||.::|:|::.:.:||||.:||.
BPUM_1978___y 51 ESRQEEAKAAAAILGVSTRIQLTLPDRGLYVNDEAMKDVASVIRTYKPKL 100
BSNT_03346___ 101 VFMPYKKDRHPDHGNAAALVEEAIFSAGIHKYKDEKSLPAHKVSKVYYYM 150
:|.||.:|||||||:|..|||||.|||||||::|....||||||::||||
BPUM_1978___y 101 IFAPYHQDRHPDHGHAGTLVEEAAFSAGIHKFEDSYKQPAHKVSQMYYYM 150
BSNT_03346___ 151 INGFHQPDFVIDISDTIEAKKQSLNAYKSQFIPSKDSVSTPLTNGYIEIV 200
|||.|:||||||||:.:..|..||:||:|||:.|.:||.|||.||||:.|
BPUM_1978___y 151 INGHHRPDFVIDISEEMHQKIDSLHAYQSQFVKSANSVETPLVNGYIDFV 200
BSNT_03346___ 201 EAREKLYGKEAGVEYAEGFFSKRMLMLDHDVLGGEQ 236
:.||.:||:|....|||||.:|:.|::|.|:|||
BPUM_1978___y 201 KMRESMYGREVNKAYAEGFITKKPLLIDDDLLGG-- 234
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