Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03343 and BPUM_1975

See DNA alignment / Visit BSNT_03343 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03343___birA.1.24716.seq
#    -bsequence pep-align/BPUM_1975___birA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03343___birA-BPUM_1975___birA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03343___birA-BPUM_1975___birA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03343___birA
# 2: BPUM_1975___birA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     207/327 (63.3%)
# Similarity:   259/327 (79.2%)
# Gaps:           2/327 ( 0.6%)
# Score: 1116.0
# 
#
#=======================================

BSNT_03343___      1 MRSTLRKDLIELFSQAGNEFISGQKISDALGCSRTAVWKHIEELRKEGYE     50
                     |||.:||.|||||:.:...|:|.|:|.|.|||||||||||:|:|||||||
BPUM_1975___b      1 MRSAIRKRLIELFTASSQNFVSSQQICDELGCSRTAVWKHMEDLRKEGYE     50

BSNT_03343___     51 VEAVRRKGYRLIKKPGKLSESEIRFGLKTEVMGQHLIYHDVLSSTQKTAH    100
                     |||||||||||::||.|:||.||.|||.||..|:|:.:...::|||..||
BPUM_1975___b     51 VEAVRRKGYRLLRKPDKISEDEILFGLDTESFGRHIYFQKEVASTQLIAH    100

BSNT_03343___    101 ELANNNSPEGTLVVADKQTAGRGRMSRVWHSQEGNGVWMSLILRPDIPLQ    150
                     :|.|..:|.|||||:|.||.|:||:.|.|||..|.|:||||||||:|||.
BPUM_1975___b    101 DLVNEGAPHGTLVVSDHQTNGKGRLQRAWHSPNGTGIWMSLILRPEIPLH    150

BSNT_03343___    151 KTPQLTLLAAVAVVQGIEEAAGIQTDIKWPNDILINGKKTVGILTEMQAE    200
                     |.||:||||:||:.:.|::..|::..||||||||:||||.||||||::||
BPUM_1975___b    151 KAPQMTLLASVAIAEAIKDQTGLRPSIKWPNDILLNGKKVVGILTELKAE    200

BSNT_03343___    201 EDRVRSVIIGIGINVNQQPNDFPDELKDIATSLSQAAGEKIDRAGVIQHI    250
                     .|:|.:||||.||||||..:|||||||::||||.....:|:|||.:||.|
BPUM_1975___b    201 ADQVHAVIIGPGINVNQTADDFPDELKNVATSLRMELNDKVDRAALIQQI    250

BSNT_03343___    251 LLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTLNGTFYGKALGI    300
                     :..|||||.||:.|||.|||.||||||:.||.::.|||:||.:.||||||
BPUM_1975___b    251 MSTFEKRYADYIKHGFAPIKQLWESYAMTIGQHIVARTVNGQYTGKALGI    300

BSNT_03343___    301 DDEGVLLLETNEGIKKIYSADIELG--    325
                     ::||||||||.|||:||||||||:.  
BPUM_1975___b    301 NEEGVLLLETEEGIQKIYSADIEIKST    327


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