Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03337 and BPUM_1971

See DNA alignment / Visit BSNT_03337 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_03337___dinG.1.24716.seq
#    -bsequence pep-align/BPUM_1971___dinG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03337___dinG-BPUM_1971___dinG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03337___dinG-BPUM_1971___dinG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03337___dinG
# 2: BPUM_1971___dinG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity:     509/951 (53.5%)
# Similarity:   659/951 (69.3%)
# Gaps:          41/951 ( 4.3%)
# Score: 2520.0
# 
#
#=======================================

BSNT_03337___      1 MNKQRFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKS     50
                     |..|||||:|:||||||||||||||||||||||||||.||:|||:||.|.
BPUM_1971___d      1 MADQRFVVVDIETTGNSPKKGDKIIQIAAVVIENGQIVERYSKYVNPGKP     50

BSNT_03337___     51 IPAFIEQLTGISNQMVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDLGFV    100
                     ||.||||||||...||::...||.:|:||:.|:.||||||||:||||.|:
BPUM_1971___d     51 IPGFIEQLTGIQQHMVDDAVFFEDIAQEVYDLIQGAYFVAHNVHFDLNFL    100

BSNT_03337___    101 KYELHKAGFQLPDCEVLDTVELSRIVFPGFEGYKLTELSEELQLRHDQPH    150
                     ..||...|....|...:||||:|||::|..||||||||||||.|.||.||
BPUM_1971___d    101 NDELKACGKNELDVLAIDTVEISRILYPELEGYKLTELSEELMLPHDHPH    150

BSNT_03337___    151 RADSDAEVTGLIFLEILEKLRQLPYPTLKQLRRLSQHFISDLTHLLDMF-    199
                     |||||||||.::||.:|.:|...|...||||||||.:.:||:..|:... 
BPUM_1971___d    151 RADSDAEVTAMLFLTLLHQLTHTPQNVLKQLRRLSSYLLSDIGLLIQQLE    200

BSNT_03337___    200 ----INENRHTEIPGYTRFSSFSVR-----EPEAIDVRINEDENFSFEIE    240
                         ..||...|:      .||:|:     |.:..:....:||....|| 
BPUM_1971___d    201 TSDASRENSLVEV------GSFAVKDVTNSEKDTTNSVGEDDEQLFEEI-    243

BSNT_03337___    241 SWEAGNEKALSELMPGYEKRDGQMMMMREVADAFANREHALIEAPPGIGK    290
                           :|.|.:.:.|||.|:||:.||.:|.|.|..|.:|||||.|||||
BPUM_1971___d    244 ------KKKLPQTVEGYEVREGQLKMMNKVRDVFHERAYALIEAAPGIGK    287

BSNT_03337___    291 TIGYLIPAALFAKKSKKPVIISTYSTLLQQQILTKDLPIVQDLFPFPVTA    340
                     |:.|||||||.||||.|||||||||.|||||:|.:|:||:..|.||...|
BPUM_1971___d    288 TLAYLIPAALEAKKSGKPVIISTYSILLQQQMLQRDMPILNQLLPFEPAA    337

BSNT_03337___    341 AILKGQSHYLCLYKFEQVLHEEDDNYDAVLTKAQLLVWLTETNTGDVAEL    390
                     .:.||::||:||.|||.||||||||||.||||||:|:||..|.|||::||
BPUM_1971___d    338 CVFKGRAHYICLDKFEHVLHEEDDNYDVVLTKAQILMWLLVTETGDLSEL    387

BSNT_03337___    391 NLPSGGKLLWDRLA---YDDDSYKRSRSEHVIGFYERAKQIALRSDLVIT    437
                     |||||...:.||::   ....|.||...|:.  ||||||:.|..:||::|
BPUM_1971___d    388 NLPSGAANIKDRISCVHMPFTSKKRRFKEYC--FYERAKRRAKTADLILT    435

BSNT_03337___    438 NHSLLLTDEGSQKKRLPESGTFIIDEAHHFERAASEHLGKRATYIELHTK    487
                     ||.|||: :.........:..::|||||.||:.|:|.||..|:||:||.|
BPUM_1971___d    436 NHRLLLS-QTEASSIFQHADVYVIDEAHQFEKTANETLGDSASYIQLHAK    484

BSNT_03337___    488 LSRIGTLKEQGLLKKMRQLFQRNSLPVDSFFELEEWLQHVQAESDAFFSS    537
                     |:::|:| :.|||||:::.|..:.|..|:|.|::|:|..:|.|||||||:
BPUM_1971___d    485 LTQLGSL-QGGLLKKLKKRFHASGLQTDTFIEMDEYLHQLQMESDAFFST    533

BSNT_03337___    538 VHSFVKRRKPKEDLNRLVFKVNKESQDKSWSILTDGAERLCSMLTHLQQL    587
                     |||||||.|||.|:|||:.:|..:|:...|..:.:.|.:|||:|...::|
BPUM_1971___d    534 VHSFVKRTKPKADINRLIHRVRHQSKHAQWKRIKETASKLCSLLIACEKL    583

BSNT_03337___    588 FEAQSSLMEKHLKGMKSKTVFLADEYQRSMKGLQHYCQTLQKLFFGSDDD    637
                     :|.|.|.:.:....:.....|.|:||.:.|..:|.:|.||.:..|...:|
BPUM_1971___d    584 YEQQKSELLQKSDQLTEHFAFEAEEYDQVMSFMQTFCSTLYRFIFEPKND    633

BSNT_03337___    638 EAVWIEIDAKGAKNAVAIYAQPLEPGELLADQFFARKNSVVLTSATLTVE    687
                     |.||||||||||||||.::||||:.||||||:||..|.||||||.|||:.
BPUM_1971___d    634 ETVWIEIDAKGAKNAVFMHAQPLDTGELLADRFFMNKKSVVLTSGTLTIN    683

BSNT_03337___    688 GSFQFMIERLGLSDFFPRTMRIESPFSYDERMQVMIPKEMKSIQDTGQPE    737
                     |.|.:.:||.||.||:|..::|||||..:::::|::|.:|..|.:..:.:
BPUM_1971___d    684 GRFDYCLERFGLQDFYPHLVQIESPFELEKQLKVIVPADMPPITNRDERD    733

BSNT_03337___    738 FIQDTARYIELMAKEKQPKILVLFTSHDMLKKVHQELKHNMSASGIQ--L    785
                     :::.:.|||:||.|:.|.||||||.||:|||.|:.|||    ..|:|  |
BPUM_1971___d    734 YVKQSVRYIKLMEKQHQAKILVLFNSHEMLKAVYDELK----TEGMQAAL    779

BSNT_03337___    786 LAQGITGGSPGKLMKTFKTSNQAILLGTNHFWEGVDFPGDELTTVMIVRL    835
                     .|||:|||||.||.|.||.:..||||||..|||||||||.|||||::.||
BPUM_1971___d    780 FAQGLTGGSPVKLTKMFKLAKHAILLGTGSFWEGVDFPGSELTTVIMARL    829

BSNT_03337___    836 PFRSPDHPLHAAKCELARKKGKNPFQTVSLPEAVLTFRQGIGRLLRSAGD    885
                     |||.||.||..|||:.|:|:|||||:.|:||||||||:||.||||||..|
BPUM_1971___d    830 PFRPPDSPLIEAKCDAAKKQGKNPFKAVALPEAVLTFKQGAGRLLRSEKD    879

BSNT_03337___    886 KGTIMILDRRIKTAGYGRLFLDALPTTSVSEMTDSELEAYVA---GEKE-    931
                     .||::|||||:|||.||:|||::||...|.|||...||||:.   .||. 
BPUM_1971___d    880 IGTLLILDRRVKTASYGKLFLESLPHAPVHEMTRESLEAYIEELNNEKPL    929

BSNT_03337___    931 -    931
                      
BPUM_1971___d    930 S    930


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03337 and BPUM_1971

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
