Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_03325 and BPUM_1964

See DNA alignment / Visit BSNT_03325 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_03325___ponA.1.24716.seq
#    -bsequence pep-align/BPUM_1964___ponA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03325___ponA-BPUM_1964___ponA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03325___ponA-BPUM_1964___ponA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03325___ponA
# 2: BPUM_1964___ponA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 928
# Identity:     606/928 (65.3%)
# Similarity:   728/928 (78.4%)
# Gaps:          39/928 ( 4.2%)
# Score: 3050.5
# 
#
#=======================================

BSNT_03325___      1 MSDQFNSREARRKANSKSSPSPKKGKKRKKGGLFKKTLFTLLILFVLGVV     50
                     |||||.|||.||||:.:::...|..|.:||.|||||...:||::.:|.:|
BPUM_1964___p      1 MSDQFTSREQRRKASQENNKKQKNKKGKKKAGLFKKIFLSLLVIGLLCLV     50

BSNT_03325___     51 GGAVTFAVMVSDAPSLDESKLKTPYSSTIYDKNGKEIAEVGAEKRTYVSI    100
                     .|..||||..|.|||:|:|||||||||.:||.:.|..|||||||||||||
BPUM_1964___p     51 AGITTFAVFASSAPSIDDSKLKTPYSSKLYDIDKKVFAEVGAEKRTYVSI    100

BSNT_03325___    101 DEIPDVVKEAFIATEDARFYEHHGIDPVRIGGALVANFKDGFGAEGGSTI    150
                     .:||||||||||||||||||:||||||:|||||||||.:|||||||||||
BPUM_1964___p    101 KDIPDVVKEAFIATEDARFYKHHGIDPIRIGGALVANVEDGFGAEGGSTI    150

BSNT_03325___    151 TQQVVKNSLLSHQKTLKRKVQEVWLSIQLERNYSKDEILEMYLNRIYFSP    200
                     |||||||:||::||||||||||||||||||:.||||||||||||||:|||
BPUM_1964___p    151 TQQVVKNTLLTNQKTLKRKVQEVWLSIQLEQKYSKDEILEMYLNRIFFSP    200

BSNT_03325___    201 RAYGIGKAAEEFFGVTDLSKLTVEQAATLAGMPQSPTAYNPVKNPDKAEK    250
                     .|||:|||||:|||||||:||||.||||||||||||:||||||||:.|||
BPUM_1964___p    201 YAYGVGKAAEQFFGVTDLNKLTVAQAATLAGMPQSPSAYNPVKNPEAAEK    250

BSNT_03325___    251 RRNIVLSLMKKQGFISDSQYNKAKKVAVKDEGVVSQKEYEKASTNKYSAF    300
                     ||||||.||||||:||:..|..||...|| :.||...:|:..:::||||:
BPUM_1964___p    251 RRNIVLGLMKKQGYISEKDYEVAKATPVK-KTVVPADKYKSQNSSKYSAY    299

BSNT_03325___    301 VEEVMKEIDEKSDVDPSADGLKIYTTLDTKAQDKLDELMDGDTVGFTEGM    350
                     :||||:|:.:|:.||.|.|||||||:||.||||.||::::||:||||:||
BPUM_1964___p    300 IEEVMEEVQKKAKVDVSTDGLKIYTSLDRKAQDHLDDIINGDSVGFTKGM    349

BSNT_03325___    351 QGGVTLLDTKNGEVRAIGAGRNQPVGGFNYATQTKAQPGSTIKPILDYGP    400
                     |.|||||||||||:||||.||:.|.|||||||..|.||||||||||||||
BPUM_1964___p    350 QAGVTLLDTKNGEIRAIGGGRDVPAGGFNYATDAKRQPGSTIKPILDYGP    399

BSNT_03325___    401 VIENKKWSTYEQIDDSAYTYSNGKPIRDWDRKYLGPISMRYALAQSRNIP    450
                     ||||||||||:||||:.||||||.||.::||::||.:|||.|||||||||
BPUM_1964___p    400 VIENKKWSTYQQIDDAPYTYSNGTPINNFDRRHLGKMSMRSALAQSRNIP    449

BSNT_03325___    451 ALKAFQAVGKDTAVDFANGLGLGLTKDNVTEAYSIGGFGGNDGVSPLTMA    500
                     ||||||..|.|.||.|||.||:.|..| :.|:||||||  :||||.|.||
BPUM_1964___p    450 ALKAFQEAGTDNAVQFANNLGMDLPSD-IPESYSIGGF--DDGVSSLKMA    496

BSNT_03325___    501 GAYSAFGNNGTYNEPHFVKSIEFNDGTKLDLTPKSKSAMSDYTAFMITDM    550
                     ||:|||||||.|||||.|.|:||||||||||||.||:|||||||||:|||
BPUM_1964___p    497 GAFSAFGNNGYYNEPHAVTSVEFNDGTKLDLTPDSKAAMSDYTAFMVTDM    546

BSNT_03325___    551 LKTAVKTGTGQLAQVPGVEVAGKTGTTNFDDNEVKRYNIASGGARDSWFV    600
                     |||||::|||.|||||.|:||||||||||..:::.:|||.||||:|||||
BPUM_1964___p    547 LKTAVQSGTGTLAQVPNVQVAGKTGTTNFTQDDINKYNIPSGGAKDSWFV    596

BSNT_03325___    601 GYTPQYTAAVWTGMGENE--AGKKSLSAEEQKVAKRIFAQLIADVDDGSG    648
                     |||||||||||||:|.::  .||..|:..||:|||.:|.:||:.:|||||
BPUM_1964___p    597 GYTPQYTAAVWTGIGNSKDADGKMWLTDYEQRVAKIVFQRLISQIDDGSG    646

BSNT_03325___    649 SFEKPDSVVEATVEKGSNPAKLAGPNTPSDKKLTEYFVKGTAPSTVSKTY    698
                     |||||||||||||||||:||||||||||||||.||||||||.|:.||.||
BPUM_1964___p    647 SFEKPDSVVEATVEKGSDPAKLAGPNTPSDKKTTEYFVKGTVPTKVSDTY    696

BSNT_03325___    699 EKEEKEETAKLSGLNVKYDKDNQSLTLSWNY--DGDATFAVKQSVDGGSY    746
                     ||:|.:   |.|.|...||::.:|:||:|.|  |.||||.|||:||.|.|
BPUM_1964___p    697 EKKEAD---KPSDLKAVYDEEKKSITLTWGYDDDADATFNVKQAVDNGGY    743

BSNT_03325___    747 SEIQNSSAKEAVISGVQPGSVYKFEVTAVSDDGKS-TASTSYEVPKAEDD    795
                     .:||||||||||||.|:|||.|||:|||..:|..| .|||...:...||:
BPUM_1964___p    744 KDIQNSSAKEAVISDVKPGSTYKFQVTATVEDVTSKAASTFLTIKDDEDE    793

BSNT_03325___    796 EDKKDQQQTDDEKQ--DDEKTQDDTQTDDSQKDDGQTDQDQTDDSTNDQD    843
                     |:|.|.:..::|.|  |||:|.   :|||::.....||:.:.||. .|||
BPUM_1964___p    794 EEKADDENKEEEPQQPDDEQTD---KTDDNKNQPPGTDEQKPDDK-KDQD    839

BSNT_03325___    844 KKQDNTNTNPSDNNNQDQSNDNDNDNSNNQDTSDGDSNSGKNDSTGSDTN    893
                     |.:|           |||..:.:|.|:.:.| :..||.:|.::|...:.:
BPUM_1964___p    840 KDKD-----------QDQGGNTENGNNGSSD-NGSDSTNGNSNSQTDNKD    877

BSNT_03325___    894 KNKTDTSNKTQTNSSSIEKTN-------    914
                     |.|.||  ||.|.|||.:.|:       
BPUM_1964___p    878 KKKDDT--KTNTQSSSSQSTSPNRKENE    903


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03325 and BPUM_1964

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
