Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03322 and BPUM_1962

See DNA alignment / Visit BSNT_03322 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_03322___yppC.1.24716.seq
#    -bsequence pep-align/BPUM_1962___yppC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03322___yppC-BPUM_1962___yppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03322___yppC-BPUM_1962___yppC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03322___yppC
# 2: BPUM_1962___yppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     209/321 (65.1%)
# Similarity:   251/321 (78.2%)
# Gaps:           6/321 ( 1.9%)
# Score: 1133.0
# 
#
#=======================================

BSNT_03322___      1 --MQEQQTIRKLLSRIERQTKIKNADNISRTNAYKAFYDRHPEIKWSLLA     48
                       .||:..|.:   .|.|:||:||.||::||||||.|||||||:||||||
BPUM_1962___y      1 MLSQEEHIITQ---HILRETKVKNKDNLTRTNAYKRFYDRHPEMKWSLLA     47

BSNT_03322___     49 SFVSRNAGWSMTDLKGSLFQLGLRERQQEWFFLAYERANWLIFSDAYPQL     98
                     ||||||||||||||||.||..||.:::...||.|||||||||||||||||
BPUM_1962___y     48 SFVSRNAGWSMTDLKGELFHPGLTDQEGHLFFTAYERANWLIFSDAYPQL     97

BSNT_03322___     99 LLYHWSKRVGKPLFHLLHVFGVSQFMSEEWTRFWHERNTERLMYALIINE    148
                     |||.||||.||||||||..|.||:|||.||.|||.:|:||||:|||||||
BPUM_1962___y     98 LLYEWSKRCGKPLFHLLPYFSVSRFMSTEWERFWLKRDTERLLYALIINE    147

BSNT_03322___    149 QNTIQTPIIQNPSFKKNVFDTIPFYLSDWLHFNTVIFPSSNGFLYGISVK    198
                     |.|||:||||||..|||||.:|.:..|:|.||.||:||:.:|.|||::::
BPUM_1962___y    148 QYTIQSPIIQNPLLKKNVFHSIQYLFSEWGHFQTVVFPTVDGHLYGLTIR    197

BSNT_03322___    199 RFSKAEERIRLGKQLSQLLFKPELFSSFYHFLHTVPHTGSRFDMEKMIGI    248
                     :||..:|||.|||:|::|||:.:|||.||||||||||||||||.|..:||
BPUM_1962___y    198 KFSNVKERITLGKKLAKLLFRADLFSDFYHFLHTVPHTGSRFDFEPFLGI    247

BSNT_03322___    249 TKRTSPMLRTCYPELIHSLDGTKTDWFHGKIKKTFFRREELPKQIELTDW    298
                     .:|::|.|||.||.:.||||..:.|||..|:..|.|..|.||||||||||
BPUM_1962___y    248 ARRSTPFLRTVYPVMTHSLDDQREDWFQKKLSPTLFDEETLPKQIELTDW    297

BSNT_03322___    299 YLHKKRQLHALFAVEQW-LKK    318
                     |.||||||..||::|.: |.|
BPUM_1962___y    298 YFHKKRQLRFLFSLEHYFLHK    318


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