Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03314 and BPUM_1958

See DNA alignment / Visit BSNT_03314 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_03314___yppG.1.24716.seq
#    -bsequence pep-align/BPUM_1958___yppG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03314___yppG-BPUM_1958___yppG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03314___yppG-BPUM_1958___yppG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03314___yppG
# 2: BPUM_1958___yppG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:      71/158 (44.9%)
# Similarity:    84/158 (53.2%)
# Gaps:          41/158 (25.9%)
# Score: 323.0
# 
#
#=======================================

BSNT_03314___      1 --------------MNGSSRSYPRQM-------GYYYPQHMQGYYQQAAP     29
                                   .|.....||...       .|:.|.| ||...||:|
BPUM_1958___y      1 MIPYSNQQPYEFNPFNQGPFPYPEMQQQPPQPPEYFMPPH-QGAMSQASP     49

BSNT_03314___     30 GYLEQQLPQQHYGQQDYYQPYAP--------IQP---MPMQPPVFSNPYP     68
                     .     :.|..||.|:...|:.|        :||   ||||.|:  ||||
BPUM_1958___y     50 A-----VYQPPYGYQENVPPFQPPEAINQPQMQPSGMMPMQQPM--NPYP     92

BSNT_03314___     69 IPRPNQQQPSQFQSIMSQFKKANGQFDFNKMMDTTGQVMSAMNQVGSLIK    118
                     :|||.:||.|||:|::|||||.|||||||||.||.||:||.|||||||.|
BPUM_1958___y     93 LPRPQKQQSSQFKSVLSQFKKTNGQFDFNKMFDTAGQMMSTMNQVGSLAK    142

BSNT_03314___    119 GFTSFFK-    125
                     ||||.|| 
BPUM_1958___y    143 GFTSIFKA    150


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