Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03301 and BPUM_1950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence pep-align/BSNT_03301___ypsC.1.24716.seq
# -bsequence pep-align/BPUM_1950.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03301___ypsC-BPUM_1950.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03301___ypsC-BPUM_1950.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03301___ypsC
# 2: BPUM_1950
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 306/385 (79.5%)
# Similarity: 345/385 (89.6%)
# Gaps: 1/385 ( 0.3%)
# Score: 1646.0
#
#
#=======================================
BSNT_03301___ 1 MKKYTLIATAPMGIEAVVAKEVRDLGYECKVDNGKVIFEGDALAICRANL 50
||.|||||||||||||:||||||||||:|.||||||||||||||||||||
BPUM_1950 1 MKTYTLIATAPMGIEAIVAKEVRDLGYDCTVDNGKVIFEGDALAICRANL 50
BSNT_03301___ 51 WLRTADRIKVQVASFKAKTFDELFEKTKAINWRSFIPENGKFPVIGKSVK 100
|||||||||||||.|.|||||||||:||||:|.:|:|:|..|||||||||
BPUM_1950 51 WLRTADRIKVQVAEFSAKTFDELFERTKAIDWAAFLPKNSTFPVIGKSVK 100
BSNT_03301___ 101 STLASVPDCQRIVKKAIVEKLKLQSGKANDWIEETGAEYKVEISLLKDQA 150
|.|||||||||||||||.:||.......::|:||||.|||:|::||||:|
BPUM_1950 101 SQLASVPDCQRIVKKAIAQKLISSYNIQSEWLEETGPEYKIEVALLKDKA 150
BSNT_03301___ 151 LITLDSSGTGLHKRGYRVDQGGAPIKETLAAALVQLTNWTPDRPFVDPFC 200
::|||:||.||||||||:||||||||||||||||.|||||||||||||||
BPUM_1950 151 VLTLDTSGVGLHKRGYRMDQGGAPIKETLAAALVLLTNWTPDRPFVDPFC 200
BSNT_03301___ 201 GSGTIAIEAALIGQNIAPGFNRDFVSEDWEWIGKDLWNKARLEVEEKANY 250
||||||||||:|||||||||||||.||.|||||:|:|||||.||||||||
BPUM_1950 201 GSGTIAIEAAMIGQNIAPGFNRDFASESWEWIGEDVWNKARHEVEEKANY 250
BSNT_03301___ 251 DQPLTIFASDIDHRMVQIAKENAEEAGLGDLIQFKQMQVKDFTTNLEFGV 300
||||.|.||||||||:.|||.|||||||.:||:|||||||||.|.:::||
BPUM_1950 251 DQPLHIIASDIDHRMIDIAKMNAEEAGLSELIEFKQMQVKDFQTKVDYGV 300
BSNT_03301___ 301 IVGNPPYGERLGEKKAVEQMYKEMGQAFEPLDTWSVYMLTSNENFEEAYG 350
|||||||||||.:|.|||:||:.||:||:.|||||:|:|||:|.|||.:|
BPUM_1950 301 IVGNPPYGERLSDKPAVEKMYQGMGEAFKSLDTWSIYILTSHEKFEECFG 350
BSNT_03301___ 351 RKATKKRKLFNGFIKTDYYQYWSKVRPQRKKTENA 385
||||||||||||||||||||||.| ||.||:|..:
BPUM_1950 351 RKATKKRKLFNGFIKTDYYQYWGK-RPPRKQTTES 384
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