Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03270 and BPUM_1930

See DNA alignment / Visit BSNT_03270 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03270___cspD.1.24716.seq
#    -bsequence pep-align/BPUM_1930___cspD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03270___cspD-BPUM_1930___cspD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03270___cspD-BPUM_1930___cspD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03270___cspD
# 2: BPUM_1930___cspD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      63/66 (95.5%)
# Similarity:    65/66 (98.5%)
# Gaps:           0/66 ( 0.0%)
# Score: 340.0
# 
#
#=======================================

BSNT_03270___      1 MQNGKVKWFNNEKGFGFIEVEGGDDVFVHFTAIEGDGYKSLEEGQEVSFE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1930___c      1 MQNGKVKWFNNEKGFGFIEVEGGDDVFVHFTAIEGDGYKSLEEGQEVSFE     50

BSNT_03270___     51 IVEGNRGPQASNVVKL     66
                     ||||||||||:||.|:
BPUM_1930___c     51 IVEGNRGPQAANVTKI     66


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