Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03267 and BPUM_1927

See DNA alignment / Visit BSNT_03267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03267.1.24716.seq
#    -bsequence pep-align/BPUM_1927___metA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03267-BPUM_1927___metA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03267-BPUM_1927___metA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03267
# 2: BPUM_1927___metA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     242/303 (79.9%)
# Similarity:   273/303 (90.1%)
# Gaps:           3/303 ( 1.0%)
# Score: 1317.5
# 
#
#=======================================

BSNT_03267         1 MPINIPTHLPAKQVLESEQIFVMDESRAFHQDIRPQKIIILNLMPKKIQT     50
                     ||||||.||||||:||||.||||||:|||.|||||..|:|||||||||||
BPUM_1927___m      1 MPINIPVHLPAKQILESENIFVMDETRAFKQDIRPLNIVILNLMPKKIQT     50

BSNT_03267        51 ETQLLRLLGNSPLQVHFTFLIPSTHTPKNTAREHLDEFYTTFSNIRHKRF    100
                     ||||||:||||||||:||||||||||||||:|||||||||||.:||||:|
BPUM_1927___m     51 ETQLLRMLGNSPLQVYFTFLIPSTHTPKNTSREHLDEFYTTFESIRHKKF    100

BSNT_03267       101 DGMIITGAPIEHLAFEEVSYWEELKEIMEWSKTNVTSTLHICWGAQAGLY    150
                     |||||||||||||||||||||:||:||::|||||||||||||||||||||
BPUM_1927___m    101 DGMIITGAPIEHLAFEEVSYWKELQEILDWSKTNVTSTLHICWGAQAGLY    150

BSNT_03267       151 YHYGVEKIQMPKKIFGVFEHTVLSKHERLVRGFDELYYVPHSRHTDINME    200
                     :|||:|||::.:|.||||||.|..|.||||||||||||||||||||||.|
BPUM_1927___m    151 HHYGIEKIKLAEKKFGVFEHLVKEKKERLVRGFDELYYVPHSRHTDINTE    200

BSNT_03267       201 QLQAVPDLNILTASKEAGVCLIVSKDEKQVFLTGHPEYDTNTLLQEYERD    250
                     ||:..|:|.:|:.|:|||||||||.|:|||||||||||||:||.||||||
BPUM_1927___m    201 QLKNTPNLKVLSVSEEAGVCLIVSDDDKQVFLTGHPEYDTDTLKQEYERD    250

BSNT_03267       251 LERNLSTVEEPKHYFAKGSNE--PVNRWKAHATLLFMNWLNYYVYQETPY    298
                     |.:: .||::|.|||.:..:.  |||||||||||||||||||||||||||
BPUM_1927___m    251 LLKD-DTVKKPVHYFIEDGDALVPVNRWKAHATLLFMNWLNYYVYQETPY    299

BSNT_03267       299 EWD    301
                     .|:
BPUM_1927___m    300 VWE    302


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