Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03263 and BPUM_1923

See DNA alignment / Visit BSNT_03263 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_03263___ypgR.1.24716.seq
#    -bsequence pep-align/BPUM_1923___ypgR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03263___ypgR-BPUM_1923___ypgR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03263___ypgR-BPUM_1923___ypgR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03263___ypgR
# 2: BPUM_1923___ypgR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity:     275/378 (72.8%)
# Similarity:   316/378 (83.6%)
# Gaps:           1/378 ( 0.3%)
# Score: 1426.0
# 
#
#=======================================

BSNT_03263___      1 MKIKSIEPTPSPNTMKVILTEELPAGKSNNYKPEQAEGAPPVIEEILKID     50
                     |||.:||||||||||||||||.|..|||||||.:|.|.||.:|:.||.|:
BPUM_1923___y      1 MKITAIEPTPSPNTMKVILTEALAGGKSNNYKKDQKEEAPEMIKRILNIE     50

BSNT_03263___     51 GVKGVYHVADFLAVERNARYDWKDILPQVRTAFGMESAESGEENRSDQES    100
                     ||||||||||||||||||::||:.||.|||.|||.::....|.::|..::
BPUM_1923___y     51 GVKGVYHVADFLAVERNAKFDWQGILQQVREAFGQQTEGLQEGSQSGGDT    100

BSNT_03263___    101 FGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQQAILKLRSEASNVV    150
                     |||||||||||:||||||||||||||||||:|||||.|||||||.:.|||
BPUM_1923___y    101 FGEVKVFVQMFNGIPMQVKLTDGEREERFGMPERFQAAILKLRSSSDNVV    150

BSNT_03263___    151 FERAWKEQGVRFGDFDEIGHDVTEELQAAYSDERLKRLTEAAAQGKGEAK    200
                     |||.|||.|||||||.:||.:|.|||||||.||||.|||||..:|:....
BPUM_1923___y    151 FERVWKEHGVRFGDFADIGQEVREELQAAYDDERLARLTEAVKEGQEAVD    200

BSNT_03263___    201 QTVQRKAYKVTLDMLDDEDWKKRYAHLEQMDPKEEDIPVLQKALDDPKVS    250
                     :.|.||||.||.|||.:||||||:||||||.|:::|||||.||::|||.|
BPUM_1923___y    201 RQVNRKAYDVTEDMLREEDWKKRFAHLEQMQPEQKDIPVLMKAMEDPKTS    250

BSNT_03263___    251 IRRQAVVYLGMIETPDVLPLLYKALEDKAVSVRRTAGDCLSDIGDPQAIP    300
                     |||||||..||||.|.:||:|||.|:||.|:||||||||:||:|||.||.
BPUM_1923___y    251 IRRQAVVNAGMIEDPAILPILYKGLKDKTVTVRRTAGDCISDLGDPSAIE    300

BSNT_03263___    301 AMIKSLSDSSKLVRWRAAMFLYEVGDESAIEALRAAEDDPEFEVSLQVKM    350
                     |||:||.|.||||||||||||||.|||:|::||:.||.||||||||||||
BPUM_1923___y    301 AMIESLKDPSKLVRWRAAMFLYEEGDETALDALKEAEQDPEFEVSLQVKM    350

BSNT_03263___    351 ALERIEHGEEAKGSVWKQMTESRKKGE-    377
                     |:||||||||||||||||||||||... 
BPUM_1923___y    351 AIERIEHGEEAKGSVWKQMTESRKNASE    378


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