Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03258 and BPUM_1922

See DNA alignment / Visit BSNT_03258 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_03258___ilvD.1.24716.seq
#    -bsequence pep-align/BPUM_1922___ilvD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03258___ilvD-BPUM_1922___ilvD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03258___ilvD-BPUM_1922___ilvD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03258___ilvD
# 2: BPUM_1922___ilvD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     515/558 (92.3%)
# Similarity:   543/558 (97.3%)
# Gaps:           0/558 ( 0.0%)
# Score: 2704.0
# 
#
#=======================================

BSNT_03258___      1 MAELRSNMITQGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGH     50
                     |||||||||.||||||||||||||||||:|||||||||||||||||||||
BPUM_1922___i      1 MAELRSNMIKQGIDRAPHRSLLRAAGVKDEDFGKPFIAVCNSYIDIVPGH     50

BSNT_03258___     51 VHLQEFGKIVKEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREII    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1922___i     51 VHLQEFGKIVKEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREII    100

BSNT_03258___    101 ADSVETVVSAHWFDGMVCIPNCDKITPGMLMAAMRINIPTIFVSGGPMAA    150
                     |||||||||||||||||||||||||||||:|||||:||||:|||||||.|
BPUM_1922___i    101 ADSVETVVSAHWFDGMVCIPNCDKITPGMMMAAMRVNIPTVFVSGGPMEA    150

BSNT_03258___    151 GRTSDGRKISLSSVFEGVGAYQAGKINENELQELEQFGCPTCGSCSGMFT    200
                     ||||||||||||||||||||||:|||||.||.||||||||||||||||||
BPUM_1922___i    151 GRTSDGRKISLSSVFEGVGAYQSGKINEEELNELEQFGCPTCGSCSGMFT    200

BSNT_03258___    201 ANSMNCLSEALGLALPGNGTILATSPERKEFVRKSAAQLMETIRKDIKPR    250
                     |||||||:||||:|||||||||||||||:||.:|||.||||.|:||||||
BPUM_1922___i    201 ANSMNCLAEALGIALPGNGTILATSPERREFAKKSAKQLMELIKKDIKPR    250

BSNT_03258___    251 DIVTVKAIDNAFALDMALGGSTNTVLHTLALANEAGVEYSLERINEVAER    300
                     ||||.|||||||||||||||||||||||||:|||||||||||||||||||
BPUM_1922___i    251 DIVTEKAIDNAFALDMALGGSTNTVLHTLAIANEAGVEYSLERINEVAER    300

BSNT_03258___    301 VPHLAKLAPASDVFIEDLHEAGGVSAALNELSKKEGALHLDALTVTGKTL    350
                     ||||:||||||||:||||||||||:||||||||||||||||.:|||.|||
BPUM_1922___i    301 VPHLSKLAPASDVYIEDLHEAGGVTAALNELSKKEGALHLDTMTVTAKTL    350

BSNT_03258___    351 GETIAGHEVKDYDVIHPLDQPFTEKGGLAVLFGNLAPDGAIIKTGGVQNG    400
                     ||.|||||||||:||:|:|:||||||||||||||||||||||||||||:|
BPUM_1922___i    351 GENIAGHEVKDYNVIYPIDKPFTEKGGLAVLFGNLAPDGAIIKTGGVQDG    400

BSNT_03258___    401 ITRHEGPAVVFDSQDEALDGIINRKVKEGDVVIIRYEGPKGGPGMPEMLA    450
                     ||||||||:||:||:|||:|||||||:.|.||||||||||||||||||||
BPUM_1922___i    401 ITRHEGPAIVFESQEEALEGIINRKVEAGHVVIIRYEGPKGGPGMPEMLA    450

BSNT_03258___    451 PTSQIVGMGLGPKVALITDGRFSGASRGLSIGHVSPEAAEGGPLAFVENG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1922___i    451 PTSQIVGMGLGPKVALITDGRFSGASRGLSIGHVSPEAAEGGPLAFVENG    500

BSNT_03258___    501 DHIIVDIEKRILDVQVPEEEWEKRKANWKGFEPKVKTGYLARYSKLVTSA    550
                     ||::||||:|||.|.|||||||||||||||||||||||||||||||||||
BPUM_1922___i    501 DHVVVDIEQRILSVDVPEEEWEKRKANWKGFEPKVKTGYLARYSKLVTSA    550

BSNT_03258___    551 NTGGIMKI    558
                     ||||||||
BPUM_1922___i    551 NTGGIMKI    558


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