Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03232 and BPUM_1899

See DNA alignment / Visit BSNT_03232 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_03232.1.24716.seq
#    -bsequence pep-align/BPUM_1899___capD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03232-BPUM_1899___capD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03232-BPUM_1899___capD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03232
# 2: BPUM_1899___capD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity:     220/343 (64.1%)
# Similarity:   274/343 (79.9%)
# Gaps:           3/343 ( 0.9%)
# Score: 1161.5
# 
#
#=======================================

BSNT_03232         1 MPKQQTAELKPFFHNKTVLVTGGTGSIGSQIVKRLLMLTPKQVIVFSKDD     50
                     |.|:....|:.||.:||:||||||||||.||||:|....||::|||||||
BPUM_1899___c      1 MSKKIEKNLRAFFRDKTILVTGGTGSIGRQIVKKLTACFPKKIIVFSKDD     50

BSNT_03232        51 SKQYVMSQKYAEDKRLLFVLGDVRDHRRVNQVMKGVDIVFHAAALKQVPT    100
                     ||||:|..:||:...:.|.||||||..||.|::|||||:|||||||||||
BPUM_1899___c     51 SKQYMMKNEYADHPEVAFALGDVRDASRVRQLVKGVDIIFHAAALKQVPT    100

BSNT_03232       101 CEDHPFEAIQTNLIGGQNVVEAALSHRVQHVINISTDKAVSPVNTMGATK    150
                     |||:||||:|||:||||:|:|||:.|.|.||:||||||||||.|.|||||
BPUM_1899___c    101 CEDNPFEAVQTNIIGGQHVIEAAIEHEVSHVVNISTDKAVSPTNAMGATK    150

BSNT_03232       151 LLSEKLFHQANRHVQNKGTLFCSVRFGNVLGSRGSVIPILFEQMMEGEPL    200
                     |:|||||.|||..:.|:.|:|||||||||||||||||||:.:|::..:||
BPUM_1899___c    151 LISEKLFFQANESIPNQKTMFCSVRFGNVLGSRGSVIPIMLQQLLNEKPL    200

BSNT_03232       201 TITDKNMTRFFMSIDDAATLTLQSAAITKGGETFIFKMESLKLEELIHGF    250
                     |:||..||||||||::|.:||||:|.:.|||||||.|||||:|.:|:..|
BPUM_1899___c    201 TVTDPLMTRFFMSIEEAVSLTLQAAIMMKGGETFILKMESLQLADLLKAF    250

BSNT_03232       251 EEYASQHGLPRPAAVEVGKRPGEKLHEELTSPHEIESLYEWGNLYAILPE    300
                     :|||.|..:..|..:.||||||||||||||.|||.::|:|....|||||.
BPUM_1899___c    251 QEYADQISVASPEILVVGKRPGEKLHEELTFPHEADALFEHEQFYAILPR    300

BSNT_03232       301 PEKHPDFRKVNLPGYQSDQAPLITKERIAQIIEELH--QEKKA    341
                     |::||||:||:|..|.|::|||||||::..|||:||  ..|| 
BPUM_1899___c    301 PKRHPDFQKVDLTNYTSNEAPLITKEKLFHIIEQLHHTHHKK-    342


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