Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03229 and BPUM_1896

See DNA alignment / Visit BSNT_03229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_03229___cgeA.1.24716.seq
#    -bsequence pep-align/BPUM_1896___cgeA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03229___cgeA-BPUM_1896___cgeA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03229___cgeA-BPUM_1896___cgeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03229___cgeA
# 2: BPUM_1896___cgeA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:      67/138 (48.6%)
# Similarity:    77/138 (55.8%)
# Gaps:          40/138 (29.0%)
# Score: 311.0
# 
#
#=======================================

BSNT_03229___      1 ----------------------------------MDSNLKDLL-EAAIDQ     15
                                                       |:..|.||| |.|.:.
BPUM_1896___c      1 MNDKRAELKKELFKVFFKPLTRALTVNLEEGGVQMEEKLNDLLSEVAAEA     50

BSNT_03229___     16 RVDESEMVTAESLLDPSLPARWIFARVTPGTTISIVTDSGDMIGPVVFVA     65
                     ...:|     .:.||.|.||||||||::|||.|||||||||:||||.||:
BPUM_1896___c     51 SPSDS-----ATTLDVSQPARWIFARLSPGTVISIVTDSGDLIGPVQFVS     95

BSNT_03229___     66 FDQVHGIVFVTQESSVTPAGQATTLIDVDKVESVTFFS    103
                     ||...|:|||||||||||.|.||||:||||||||||.|
BPUM_1896___c     96 FDASTGVVFVTQESSVTPTGSATTLLDVDKVESVTFTS    133


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