Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03226 and BPUM_1894

See DNA alignment / Visit BSNT_03226 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_03226___cgeD.1.24716.seq
#    -bsequence pep-align/BPUM_1894___cgeD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03226___cgeD-BPUM_1894___cgeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03226___cgeD-BPUM_1894___cgeD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03226___cgeD
# 2: BPUM_1894___cgeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity:     186/436 (42.7%)
# Similarity:   261/436 (59.9%)
# Gaps:          15/436 ( 3.4%)
# Score: 932.0
# 
#
#=======================================

BSNT_03226___      1 MGEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVI     50
                     |..|||:|||||||||::.:.::|:::||:..|||.||||.|..:|...|
BPUM_1894___c      1 MIMKVSVILTSYNKPDFIDRVLKSMVEQTYSNWELLIMDDGSEQDTIEKI     50

BSNT_03226___     51 HKYLHDRRIQYHNSFVHPADRLKTARYATLINSALPFADGDYISYLTDDT    100
                     ..||.|.||..::..||||.||.|.|||||||.||....|:.|.||||||
BPUM_1894___c     51 QTYLEDERIHLYSRTVHPAKRLLTVRYATLINEALARITGELICYLTDDT    100

BSNT_03226___    101 VYHPERLSRMMQEFSHKPEAQAVYSKQKVVHVNERGEEISHFYRNANAVL    150
                     |||.:||.:|:..|..||....|||.|:||||:::..|...|.|.|:.:|
BPUM_1894___c    101 VYHQDRLQKMVDVFQSKPHIDIVYSSQRVVHVDKQLVETMSFVREADKIL    150

BSNT_03226___    151 DQAAFQVDHCSVMHRRSLLNLIHHKFGGYWDDDMKHWNHGDAIFWARLNN    200
                     :.|:||||||||||||.||.|||.|:|.||||:.|||:|.|::||.|||.
BPUM_1894___c    151 EHASFQVDHCSVMHRRRLLPLIHEKYGQYWDDEAKHWHHADSVFWMRLNQ    200

BSNT_03226___    201 FTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKGSDQNVYFFDQ    250
                     |..|.|:.:|||||||||.||.:.:..:|.|||||:.:: .:.:.|....
BPUM_1894___c    201 FAAFYPLRDVLDTTYKTPHSFHHLFSSMPYDLIDGTVIE-KEGDYYQIAS    249

BSNT_03226___    251 GVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADH-P    299
                     |..|.:...|......|.:.||.....:|.|..:|.:|||.:| .||| .
BPUM_1894___c    250 GNLHRIERCWVNEKNRRAIRVPSLCAMKYEIKDMLAVPNYTVV-TADHGK    298

BSNT_03226___    300 AIFYIEAGKKRRIVDQYAFQFYQFQRKDIVTIGKEEMETLPEGPPITWKR    349
                     ..:|||..||||...:...|::||..|:|.||..|.::...:|..|   :
BPUM_1894___c    299 TFYYIEDQKKRRFASKRDVQYFQFHSKEIYTISNERLQMYEDGGMI---Q    345

BSNT_03226___    350 SELIKNPPGRRLFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFR    399
                     ...:.:||.||||..::|.:|.::..|..|..:|.::|..:.:||:....
BPUM_1894___c    346 VSPVFHPPNRRLFKWKQEVYLLMHYTFCRIDPEVVKRFAFYHQPINLYPS    395

BSNT_03226___    400 NIQQFPIGKPFYPVYDEIIKKLNIATE---------    426
                     ....|..|||..|:|.|.:::.:::..         
BPUM_1894___c    396 QFTLFQEGKPIMPLYMESLQEFDMSLYQTSGRKHSS    431


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