Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03215 and BPUM_1892

See DNA alignment / Visit BSNT_03215 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_03215___kamA.1.24716.seq
#    -bsequence pep-align/BPUM_1892___kamA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03215___kamA-BPUM_1892___kamA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03215___kamA-BPUM_1892___kamA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03215___kamA
# 2: BPUM_1892___kamA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 475
# Identity:     389/475 (81.9%)
# Similarity:   433/475 (91.2%)
# Gaps:          13/475 ( 2.7%)
# Score: 2124.0
# 
#
#=======================================

BSNT_03215___      1 MKNKWYKPKRHWKEIELWKDVPEEKWNDWLWQLTHTVRTLDDLKKVINLT     50
                     |..|.|:|.||||:|||||||||||||||:|||||||:||:||:|::|||
BPUM_1892___k      1 MNQKLYEPARHWKDIELWKDVPEEKWNDWIWQLTHTVKTLEDLEKIVNLT     50

BSNT_03215___     51 EDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSVPLSEEMHKTK    100
                     |:|.|||:||||||||||||||||||:||:|||||||||||::||:||||
BPUM_1892___k     51 EEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPIAEELHKTK    100

BSNT_03215___    101 YDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSGQI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1892___k    101 YDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSGQI    150

BSNT_03215___    151 GMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSI    200
                     |||||||||||||.|||||||:||.|||||||||||||:||||||.||.|
BPUM_1892___k    151 GMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDI    200

BSNT_03215___    201 PHLEVIRIGTRAPVVFPQRITDHLCEILKKYHPVWLNTHFNTSIEMTEES    250
                     ||:|:|||||||||||||||||.||||||||||||||||||||||:|:|:
BPUM_1892___k    201 PHVEIIRIGTRAPVVFPQRITDELCEILKKYHPVWLNTHFNTSIEITKEA    250

BSNT_03215___    251 VEACEKLVNAGVPVGNQAVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQ    300
                     .||||:|||||||||||||:|||||||||||||||||||.||||||||||
BPUM_1892___k    251 KEACERLVNAGVPVGNQAVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQ    300

BSNT_03215___    301 CDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVDAPGGGGKIALQ    350
                     |||||||||||.||||||||||||||||||||||:|||||||||||||||
BPUM_1892___k    301 CDLSEGIGHFRTPVSKGLEIIEGLRGHTSGYAVPSFVVDAPGGGGKIALQ    350

BSNT_03215___    351 PNYVLSQSPDKVTLRNFEGVITSYPEPENYIPNQADAYFESVFPETADKK    400
                     |||:||||||||.|||||||||||||||:|:..||||||..::.|   |:
BPUM_1892___k    351 PNYLLSQSPDKVVLRNFEGVITSYPEPEHYVAGQADAYFNEIYEE---KQ    397

BSNT_03215___    401 EP-IGLSAIFADKEVSFTPENVDRIKRREAYIANPEHETLKDRREKRDQL    449
                     :| ||::|:|.|:..||||||:.|:||||||..||||:|||::|||||:|
BPUM_1892___k    398 DPAIGITALFQDEAKSFTPENLSRMKRREAYETNPEHDTLKNKREKRDEL    447

BSNT_03215___    450 KEKKFLAQQKKQ---KETECGGDSS    471
                     ||||:.||.||.   ||.:      
BPUM_1892___k    448 KEKKYQAQLKKDQTVKEEK------    466


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