Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03198 and BPUM_1883

See DNA alignment / Visit BSNT_03198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_03198___yodJ.1.24716.seq
#    -bsequence pep-align/BPUM_1883___yodJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03198___yodJ-BPUM_1883___yodJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03198___yodJ-BPUM_1883___yodJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03198___yodJ
# 2: BPUM_1883___yodJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     187/281 (66.5%)
# Similarity:   226/281 (80.4%)
# Gaps:          13/281 ( 4.6%)
# Score: 941.0
# 
#
#=======================================

BSNT_03198___      1 MKKSGKWFSLAAALSVTAIVGAGCSMSNGDAQKDTKTTAETKQTEQKTAD     50
                     ||||.|..|:|:.|.:||.: :||.:.:   || :.|:...|..|||:|:
BPUM_1883___y      1 MKKSYKILSIASILGLTAAL-SGCQLLD---QK-SGTSESNKTNEQKSAE     45

BSNT_03198___     51 --SKKSNTQNS------EFSLESQYFNDIKKVDGLETIQNPENILALVNK     92
                       |.:.|:.|:      |.:|:|:||||||.|.||:|||||.|:||||||
BPUM_1883___y     46 NSSTQQNSNNTADSSDQELTLKSEYFNDIKVVSGLKTIQNPANVLALVNK     95

BSNT_03198___     93 QYALPGNYEPSDLVIPDVEFSFEEKIQKRYIRKEAADALKTMFDAAKKEG    142
                     :|||||.|:|||||:|.|||||.|.|:|||||||||:||:|:|..|||:.
BPUM_1883___y     96 EYALPGTYKPSDLVVPKVEFSFSEDIEKRYIRKEAAEALETLFKDAKKKN    145

BSNT_03198___    143 YELAAVSGYRSYDRQKVIFDNEVSLKGEKKAKEAVAYPGESEHQTGLAMD    192
                     :|||||||||||||||||||:||.|||::||:||||.|||||||||||||
BPUM_1883___y    146 FELAAVSGYRSYDRQKVIFDSEVKLKGKEKAQEAVALPGESEHQTGLAMD    195

BSNT_03198___    193 ISSRSNGFELNEAFGSTADGKWVQDNAYKYGFIIRYPKNKEDITKYEYEP    242
                     |||:|.||:::|.||.|.|||||..|||||||||||||.|||||||||||
BPUM_1883___y    196 ISSKSAGFDISEKFGETPDGKWVAKNAYKYGFIIRYPKGKEDITKYEYEP    245

BSNT_03198___    243 WHLRYVGKKAAKVIQDNDLTLEEYFEKVKKI    273
                     ||||||||:|||.:.|:|||.|||..|||||
BPUM_1883___y    246 WHLRYVGKEAAKAMHDHDLTFEEYMNKVKKI    276


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