Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03196 and BPUM_1881
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_03196___yodH.1.24716.seq
# -bsequence pep-align/BPUM_1881.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03196___yodH-BPUM_1881.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03196___yodH-BPUM_1881.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03196___yodH
# 2: BPUM_1881
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 110/233 (47.2%)
# Similarity: 149/233 (63.9%)
# Gaps: 1/233 ( 0.4%)
# Score: 549.0
#
#
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BSNT_03196___ 1 MSRYLEMLSLFGVAGAHPGGLAFSKAVLQKAAPSPNQPILDAGCGTGQTA 50
||.|:|||:.|||:.|||||:..:|.:|:....:|...||||||||||||
BPUM_1881 1 MSDYVEMLAYFGVSSAHPGGIELTKTMLEHIKLTPEARILDAGCGTGQTA 50
BSNT_03196___ 51 AYLGHLLYPVTVVDKDPIMLEKAKKRFANEGLAIPAYQAELEHLPFSSES 100
||||::.|.|..:|..|:|:|||..||..|.|.|.|.||.:|.|||..|.
BPUM_1881 51 AYLGNIGYQVEAIDTHPLMIEKANLRFEREELPIRALQASIEQLPFPDEV 100
BSNT_03196___ 101 FSCVLSESVLSFSRLTSSLQEISRVLKPGGMLIGIEAALKKPMPPAEKKQ 150
|:.::|||||||:.|.::|.||.|||.||..:|..||.||.|:.|.|...
BPUM_1881 101 FNLLISESVLSFTNLPAALAEIKRVLAPGSQMIANEAVLKAPLTPKELAT 150
BSNT_03196___ 151 MMDFYGFTCLHEESEWHKLLRSYGFQKTEAMTLLPEDMEFEPTTEMDLSQ 200
:.|||||..|....:|.:.|::.|||....:: ..|.|..|..|||:||:
BPUM_1881 151 VRDFYGFHALFSVEDWQEQLKAAGFQDVRILS-FDEHMVQEEPTEMELSE 199
BSNT_03196___ 201 TIDPIYYDTLQTHYQLMQLYSEYMGHCIFIAYK 233
.|.|..|:|:||||.|:|.:.:::.|.:|....
BPUM_1881 200 YIPPSLYETMQTHYDLIQAHRKHLSHILFECTV 232
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