Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03151 and BPUM_1860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence pep-align/BSNT_03151___yocS.1.24716.seq
# -bsequence pep-align/BPUM_1860___yocS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03151___yocS-BPUM_1860___yocS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03151___yocS-BPUM_1860___yocS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03151___yocS
# 2: BPUM_1860___yocS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 229/321 (71.3%)
# Similarity: 267/321 (83.2%)
# Gaps: 5/321 ( 1.6%)
# Score: 1168.0
#
#
#=======================================
BSNT_03151___ 1 MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYITIFLGIIMFG 50
|.|:..||.|||:||.|||||||.|||:||:.|:.|.|||...|||||||
BPUM_1860___y 1 MKILLSISQFAGRTFAIWVIVFAFLGFAFPAEFSKIGSYIPFLLGIIMFG 50
BSNT_03151___ 51 MGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPAEIAV 100
|||||.|:|||||.|||..|:|||:.|||:|||:||.||:||.||:||||
BPUM_1860___y 51 MGLTLSAEDFKELFRKPLYVLIGVLTQYTLMPLLAFLLAYGLRLPSEIAV 100
BSNT_03151___ 101 GVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIMLF 150
||:|||||||||||||||||||||||||||||||||||||.:||:.|::|
BPUM_1860___y 101 GVVLVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPFLTPVFILIF 150
BSNT_03151___ 151 AKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSV 200
||.||||||.:||:||:|.||.||:.|:|||:||:|||..||.|||||||
BPUM_1860___y 151 AKSWLPVSPEALFLSIVQVVLIPIVLGVIVKLFFKKQVTYAVQALPLVSV 200
BSNT_03151___ 201 IGIVAIVSAVVSGNRENLLQSGLLIFSVVILHNGIGYLLGFLCAKLLKMD 250
.|||.|::|:||.|:|.:|||||||.:|||||||:|.|.|:|.||..|||
BPUM_1860___y 201 AGIVMIIAAIVSANKEQILQSGLLILAVVILHNGLGLLFGYLIAKWCKMD 250
BSNT_03151___ 251 YPSQKAIAIEVGMQNSGLGAALATAHFSPLSAVPSAIFSVWHNLSGSMLA 300
.||::||:||||||||||||||||||||||:||||||||||||||||.||
BPUM_1860___y 251 IPSRRAISIEVGMQNSGLGAALATAHFSPLAAVPSAIFSVWHNLSGSWLA 300
BSNT_03151___ 301 TYWSKKVKKIQAGSESSNLSL 321
|||||:........:|
BPUM_1860___y 301 TYWSKRGNAESEKKKS----- 316
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