Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03151 and BPUM_1860

See DNA alignment / Visit BSNT_03151 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_03151___yocS.1.24716.seq
#    -bsequence pep-align/BPUM_1860___yocS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03151___yocS-BPUM_1860___yocS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03151___yocS-BPUM_1860___yocS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03151___yocS
# 2: BPUM_1860___yocS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     229/321 (71.3%)
# Similarity:   267/321 (83.2%)
# Gaps:           5/321 ( 1.6%)
# Score: 1168.0
# 
#
#=======================================

BSNT_03151___      1 MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYITIFLGIIMFG     50
                     |.|:..||.|||:||.|||||||.|||:||:.|:.|.|||...|||||||
BPUM_1860___y      1 MKILLSISQFAGRTFAIWVIVFAFLGFAFPAEFSKIGSYIPFLLGIIMFG     50

BSNT_03151___     51 MGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPAEIAV    100
                     |||||.|:|||||.|||..|:|||:.|||:|||:||.||:||.||:||||
BPUM_1860___y     51 MGLTLSAEDFKELFRKPLYVLIGVLTQYTLMPLLAFLLAYGLRLPSEIAV    100

BSNT_03151___    101 GVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIMLF    150
                     ||:|||||||||||||||||||||||||||||||||||||.:||:.|::|
BPUM_1860___y    101 GVVLVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPFLTPVFILIF    150

BSNT_03151___    151 AKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSV    200
                     ||.||||||.:||:||:|.||.||:.|:|||:||:|||..||.|||||||
BPUM_1860___y    151 AKSWLPVSPEALFLSIVQVVLIPIVLGVIVKLFFKKQVTYAVQALPLVSV    200

BSNT_03151___    201 IGIVAIVSAVVSGNRENLLQSGLLIFSVVILHNGIGYLLGFLCAKLLKMD    250
                     .|||.|::|:||.|:|.:|||||||.:|||||||:|.|.|:|.||..|||
BPUM_1860___y    201 AGIVMIIAAIVSANKEQILQSGLLILAVVILHNGLGLLFGYLIAKWCKMD    250

BSNT_03151___    251 YPSQKAIAIEVGMQNSGLGAALATAHFSPLSAVPSAIFSVWHNLSGSMLA    300
                     .||::||:||||||||||||||||||||||:||||||||||||||||.||
BPUM_1860___y    251 IPSRRAISIEVGMQNSGLGAALATAHFSPLAAVPSAIFSVWHNLSGSWLA    300

BSNT_03151___    301 TYWSKKVKKIQAGSESSNLSL    321
                     |||||:........:|     
BPUM_1860___y    301 TYWSKRGNAESEKKKS-----    316


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