Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03130 and BPUM_1851

See DNA alignment / Visit BSNT_03130 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_03130___yocH.1.24716.seq
#    -bsequence pep-align/BPUM_1851___yocH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03130___yocH-BPUM_1851___yocH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03130___yocH-BPUM_1851___yocH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03130___yocH
# 2: BPUM_1851___yocH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     190/288 (66.0%)
# Similarity:   224/288 (77.8%)
# Gaps:          26/288 ( 9.0%)
# Score: 897.5
# 
#
#=======================================

BSNT_03130___      1 MKKTIMSFVAVAALSTTAFGA-HASAKEITVQKGDTLWGISQKNGVNLKD     49
                     |||||||.|||||:||||||| .|||||||||||||||||||||.|:|||
BPUM_1851___y      1 MKKTIMSLVAVAAISTTAFGAQQASAKEITVQKGDTLWGISQKNDVSLKD     50

BSNT_03130___     50 LKEWNKLTSDKIIAGEKLTISSEETTTTGQYTIKAGDTLSKIAQKFGTTV     99
                     ||.||.|::|.|..|:||||||:|.|.. ||.::.||:|.||||||..::
BPUM_1851___y     51 LKGWNNLSTDMIYVGDKLTISSKEKTQE-QYKVQKGDSLWKIAQKFNVSI     99

BSNT_03130___    100 NNLKVWNNLSSDMIYAGSTLSVKGQATAANTATENAQTNAPQAAPKQEAV    149
                     :::|.||||:||:|..||||||.||::|. .::|..|        |||.|
BPUM_1851___y    100 SDIKSWNNLNSDIIMVGSTLSVAGQSSAP-VSSEPVQ--------KQEPV    140

BSNT_03130___    150 QKEQPKQEAVQQQPKQETKAEAETSVNTEEKAVQSNTNNQEASKELTVTA    199
                     ||||..::|.   ||:|| |:||           |::.:|...||:||||
BPUM_1851___y    141 QKEQTTKKAA---PKKET-AKAE-----------SSSASQSVQKEMTVTA    175

BSNT_03130___    200 TAYTANDGGISGVTATGIDLNKNPNAKVIAVDPNVIPLGSKVYVEGYGEA    249
                     ||||||||||||:||||::||||||||||||||:||||||||||||||||
BPUM_1851___y    176 TAYTANDGGISGITATGVNLNKNPNAKVIAVDPSVIPLGSKVYVEGYGEA    225

BSNT_03130___    250 TAGDTGGAIKGNKIDVFVPSKSDASNWGVKTVNVKILN    287
                     .|.|||||||||||||.|||||.|.|||||:|.||:||
BPUM_1851___y    226 IAADTGGAIKGNKIDVHVPSKSQAKNWGVKSVKVKVLN    263


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