Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03121 and BPUM_1850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03121___yocC.1.24716.seq
# -bsequence pep-align/BPUM_1850___yocC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03121___yocC-BPUM_1850___yocC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03121___yocC-BPUM_1850___yocC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03121___yocC
# 2: BPUM_1850___yocC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 103/194 (53.1%)
# Similarity: 137/194 (70.6%)
# Gaps: 29/194 (14.9%)
# Score: 570.5
#
#
#=======================================
BSNT_03121___ 1 --------------------------MFTIKE--KNRQELEEELNDLEFQ 22
:..::| |:.:.||::|..|:||
BPUM_1850___y 1 MKDPSTSFKIGIYVIFIISDRKGVMDLSILQETAKDVKSLEQDLQQLQFQ 50
BSNT_03121___ 23 IYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQTCKIMLTDCKTA 72
:|||||||||:||.||::||||:|.|||:|||:|::..||||||:||:.|
BPUM_1850___y 51 MYRMQENMKDISKKAKIIGIDQAKEDEWLIVSAIENADTCKIMLSDCEKA 100
BSNT_03121___ 73 YRGKGCFSLVASYKDDA-IHIGDIKGPPNHGFGSICMKYLKDIARDHNIP 121
:||:..|||:|.|.::. |||.||||||::|:||||||:||:|||:.|||
BPUM_1850___y 101 FRGQSDFSLIAEYPEEGKIHIADIKGPPDNGYGSICMKHLKEIAREQNIP 150
BSNT_03121___ 122 KVTGDIAKRDWNHVDRLIHFYEKHQFKVCIDHDTQSGSIKWVDL 165
.:|||:.||||:||||||||||||||.|.|:...|||.|.|||.
BPUM_1850___y 151 VITGDLVKRDWDHVDRLIHFYEKHQFDVQINWKEQSGEIYWVDS 194
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