Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03121 and BPUM_1850

See DNA alignment / Visit BSNT_03121 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_03121___yocC.1.24716.seq
#    -bsequence pep-align/BPUM_1850___yocC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03121___yocC-BPUM_1850___yocC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03121___yocC-BPUM_1850___yocC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03121___yocC
# 2: BPUM_1850___yocC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity:     103/194 (53.1%)
# Similarity:   137/194 (70.6%)
# Gaps:          29/194 (14.9%)
# Score: 570.5
# 
#
#=======================================

BSNT_03121___      1 --------------------------MFTIKE--KNRQELEEELNDLEFQ     22
                                               :..::|  |:.:.||::|..|:||
BPUM_1850___y      1 MKDPSTSFKIGIYVIFIISDRKGVMDLSILQETAKDVKSLEQDLQQLQFQ     50

BSNT_03121___     23 IYRMQENMKDLSKDAKVLGIDQSKHDEWMIVSSIDDGQTCKIMLTDCKTA     72
                     :|||||||||:||.||::||||:|.|||:|||:|::..||||||:||:.|
BPUM_1850___y     51 MYRMQENMKDISKKAKIIGIDQAKEDEWLIVSAIENADTCKIMLSDCEKA    100

BSNT_03121___     73 YRGKGCFSLVASYKDDA-IHIGDIKGPPNHGFGSICMKYLKDIARDHNIP    121
                     :||:..|||:|.|.::. |||.||||||::|:||||||:||:|||:.|||
BPUM_1850___y    101 FRGQSDFSLIAEYPEEGKIHIADIKGPPDNGYGSICMKHLKEIAREQNIP    150

BSNT_03121___    122 KVTGDIAKRDWNHVDRLIHFYEKHQFKVCIDHDTQSGSIKWVDL    165
                     .:|||:.||||:||||||||||||||.|.|:...|||.|.|||.
BPUM_1850___y    151 VITGDLVKRDWDHVDRLIHFYEKHQFDVQINWKEQSGEIYWVDS    194


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