Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03114 and BPUM_1843

See DNA alignment / Visit BSNT_03114 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_03114___yozA.1.24716.seq
#    -bsequence pep-align/BPUM_1843___yozA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03114___yozA-BPUM_1843___yozA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03114___yozA-BPUM_1843___yozA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03114___yozA
# 2: BPUM_1843___yozA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      86/109 (78.9%)
# Similarity:    96/109 (88.1%)
# Gaps:           2/109 ( 1.8%)
# Score: 431.5
# 
#
#=======================================

BSNT_03114___      1 MTEFRET--EQSAADLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAV     48
                     |.|...|  ||...:||||:||||:|||||||||||||||||||||||:|
BPUM_1843___y      1 MKEELNTNQEQERMELDEESLFLVSQTFKALSDPTRIRILHLLSQGEHSV     50

BSNT_03114___     49 NGIAEKLNLLQSTVSHQLRFLKNLRLVKSRREGTSIYYSPEDEHVLDVLQ     98
                     |.|||.|||:|||||||||||||||||||||.||||:|||||:||::||:
BPUM_1843___y     51 NDIAETLNLMQSTVSHQLRFLKNLRLVKSRRAGTSIFYSPEDQHVMEVLE    100

BSNT_03114___     99 QMIHHTQHD    107
                     |||||.|||
BPUM_1843___y    101 QMIHHAQHD    109


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