Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03060 and BPUM_1824
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence pep-align/BSNT_03060.1.24716.seq
# -bsequence pep-align/BPUM_1824___proH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03060-BPUM_1824___proH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03060-BPUM_1824___proH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03060
# 2: BPUM_1824___proH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity: 105/271 (38.7%)
# Similarity: 120/271 (44.3%)
# Gaps: 119/271 (43.9%)
# Score: 510.0
#
#
#=======================================
BSNT_03060 0 -------------------------------------------------- 0
BPUM_1824___p 1 MAEGMIAGIVRSGQMPPGQIYATNRQNQLRLNELTTRYGIQTATMDSFPF 50
BSNT_03060 0 -------------------------------------------------- 0
BPUM_1824___p 51 EEMDMLILAMKPKDAETALESLKPHIQRDQLILSVLAGVKQSYIEDMLHE 100
BSNT_03060 1 -------------MIGASATAIALGKYVSEDLKKLAEALLGCMGEVYTIQ 37
.|||||||:..|:||.:|...:::|||..||||||||
BPUM_1824___p 101 GQPVMRVMPNTSSTIGASATALCAGRYVKDDHISMSQALLSEMGEVYTIQ 150
BSNT_03060 38 ENQMDIFTGIAGSGPAYFYYLTEFIEKTGEEAGLDKQLSRSIGAQTLLGA 87
|.|||||||||||||||||:|.|.||:.||||||.|:|||.|||||||||
BPUM_1824___p 151 EEQMDIFTGIAGSGPAYFYFLMERIEEAGEEAGLSKELSRQIGAQTLLGA 200
BSNT_03060 88 AKMLMETGEHPEILRDNITSPNGTTAAGLQALKKSGGGEAISQAIKHAAK 137
||||.||.|.|..||:.||||||||||||.||...||||||.||:||||.
BPUM_1824___p 201 AKMLQETEEDPSALREKITSPNGTTAAGLNALDDFGGGEAIKQAVKHAAN 250
BSNT_03060 138 RSKEISEGIEKTAAPLSGVIK 158
||||||:..::..:.
BPUM_1824___p 251 RSKEISKQQKQKVSI------ 265
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