Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01366 and BPUM_1816

See DNA alignment / Visit BSNT_01366 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_01366___yfiB.1.24716.seq
#    -bsequence pep-align/BPUM_1816___yfiB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01366___yfiB-BPUM_1816___yfiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01366___yfiB-BPUM_1816___yfiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01366___yfiB
# 2: BPUM_1816___yfiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 581
# Identity:     232/581 (39.9%)
# Similarity:   361/581 (62.1%)
# Gaps:          12/581 ( 2.1%)
# Score: 1069.0
# 
#
#=======================================

BSNT_01366___      1 MQKALSFLKPYSLLAGIALILMLTELA--VELMQPLLIAKIIDDGILKQD     48
                     |:..|||||||.|  .:..|::||.|:  ::|..|.|.|.|:|.||::.|
BPUM_1816___y      1 MKSILSFLKPYRL--SVVSIVILTFLSSMLQLYLPTLTADIVDVGIVQGD     48

BSNT_01366___     49 LRHVWIWGAVMIGLTVLSFAAGMLNSFYAAHVSQSFSYDTRKGLFQKIQS     98
                     :.::|..|..|:..::|:....:..|:.::..:..|..|.|:.||..::.
BPUM_1816___y     49 IAYIWKVGGWMVACSLLAILLTIWKSYLSSKTALGFGRDMRRQLFVHVEQ     98

BSNT_01366___     99 FSYSTFGQFSSSSYITRLTNDVTQVQNMIFMSLRFMLRAPLMIAGGIVLS    148
                     ||...|.:..:||:|||.||||.|||::..|.|:.|.|||||:.|||:|:
BPUM_1816___y     99 FSLEEFQKIGTSSFITRSTNDVKQVQDVTIMILQMMTRAPLMLVGGIILA    148

BSNT_01366___    149 LAVNVKLGFFLLVTIPILILFLLWVLRKGGALFRSVQKRLDQVNTIMQEN    198
                     ::.:..|....|..:|:|..|:..|.||...||..:||:.|::|.||:|:
BPUM_1816___y    149 VSRDAVLSLIFLAALPLLGGFIYLVSRKAIPLFGQLQKKTDRLNLIMRES    198

BSNT_01366___    199 LIAIKLIKALLRGSHEVKRFIKANTRLMEKTVSAFQLVEFTMPVLMLLMN    248
                     |..|::|:|..|...|.:||.:|||...:..:...:|:.:..|.::::||
BPUM_1816___y    199 LSGIRVIRAFNRVDDEKERFQEANTSYKDTGLRVNRLMAYLFPFMLIIMN    248

BSNT_01366___    249 LCILLILWAGSYSITSGSTQVGDVVAIINYATRITGALSMFPFLIMIFTR    298
                     ...:.|:|.|:..|.:|..:||:::|.|.||..|..||.|.....::..|
BPUM_1816___y    249 FTNIGIVWLGANRIDAGEMEVGNLIAFIQYAMMILMALIMLSMSFIMVPR    298

BSNT_01366___    299 AKASGDRIGEVLETEGD-EREEGIIFD-RLSGQ-IEFQHVSFRYPEMDRE    345
                     |:||..|:.|||..|.. :..||.:.| |...| |.|:.|||.|...::.
BPUM_1816___y    299 AQASAKRMNEVLNMEPKIQDNEGTVTDLRAPAQSIRFEDVSFYYSNAEKS    348

BSNT_01366___    346 ALRNVSFSAKPRETIAILGATGSGKSTLFQLIPRLYQPDSGRIYIDEKPV    395
                     |:::::|.||..||.||:|:|||||:||.||:.|.|:...|||.:|...:
BPUM_1816___y    349 AVQDITFEAKTGETTAIIGSTGSGKTTLLQLMTRFYEATEGRITLDGVDI    398

BSNT_01366___    396 QDIPAEGLRRQIGYVPQEVLLFSGTIKENIAWGKENASLDEIMDAAKHAQ    445
                     :|:|.|.||.|:|||.|:.:||||||.:|:.:|:::||.:::..|.:.||
BPUM_1816___y    399 RDLPQEKLRSQMGYVSQKAVLFSGTIADNVRFGRQDASDEDVWQALRTAQ    448

BSNT_01366___    446 IHETILKLPNGYDTVLGQRGVNLSGGQKQRISIARALIRKPAILLLDDST    495
                     ..|.:|:...|.|..:.|.|.|||||||||:||||||:|||:..|.|||.
BPUM_1816___y    449 AEEFVLQKDGGIDAEIDQGGSNLSGGQKQRLSIARALVRKPSFYLFDDSF    498

BSNT_01366___    496 SALDLQTEAKL---LEAISTYHCTTLIITQKITTAMKADQILLLEDGELI    542
                     ||||.:|:|||   ||| ...|...:|:.|:|:|...:|:|::|::|::.
BPUM_1816___y    499 SALDYKTDAKLRASLEA-EKAHAALIIVAQRISTVKHSDKIIVLDEGKIA    547

BSNT_01366___    543 EKGTHSELLSASQLYKRIYESQFGREGSESC    573
                     ..|||.:||..:.:|:.|..||.|:|.... 
BPUM_1816___y    548 GIGTHEQLLKDNLVYQEIVASQEGQEVERG-    577


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01366 and BPUM_1816

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
