Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00581 and BPUM_1811

See DNA alignment / Visit BSNT_00581 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:23
# Commandline: needle
#    -asequence pep-align/BSNT_00581___nasD.1.24716.seq
#    -bsequence pep-align/BPUM_1811___nasD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00581___nasD-BPUM_1811___nasD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00581___nasD-BPUM_1811___nasD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00581___nasD
# 2: BPUM_1811___nasD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 808
# Identity:     574/808 (71.0%)
# Similarity:   688/808 (85.1%)
# Gaps:           5/808 ( 0.6%)
# Score: 3083.0
# 
#
#=======================================

BSNT_00581___      1 MGKKQLVLVGNGMAGVRAIEEILSVAKDEFQITIFGAEPHPNYNRILLSK     50
                      .|::||||||||||:|:||.||.:..:.|::|:||:|||||||||||||
BPUM_1811___n      1 -MKERLVLVGNGMAGIRSIENILKMDSERFEMTVFGSEPHPNYNRILLSK     49

BSNT_00581___     51 VLQGDTDIKDITLNDWDWYEENNIQLYTNETVIKVDTENKTVITDADRIQ    100
                     ||||||.::|||||||:|||.::|||:||||::||||||:||.:|..|..
BPUM_1811___n     50 VLQGDTMVEDITLNDWNWYEAHDIQLFTNETIVKVDTENQTVTSDQGRTV     99

BSNT_00581___    101 PYDELILATGSLPFILPIPGADKKGVTAFRDIKDTDTMLTASKQYKKAAV    150
                     |||.||||||||||||||||:||||||.||.::||:.|::||.:||||||
BPUM_1811___n    100 PYDRLILATGSLPFILPIPGSDKKGVTGFRTLQDTEEMVSASHKYKKAAV    149

BSNT_00581___    151 IGGGLLGLEAARGLLNLGMDVSVIHLAPFLMERQLDATAGRLLQNELEKQ    200
                     |||||||||||||||||||:|:||||.|.|||||||.|||:|||..||:|
BPUM_1811___n    150 IGGGLLGLEAARGLLNLGMEVNVIHLCPHLMERQLDPTAGQLLQKALEEQ    199

BSNT_00581___    201 GMTFLLEKQTEEIVGDDRVEGLRFKDGTSIEADLVVMAVGIRPNTTLGAE    250
                     ||.|||.|:|.||:||.|||||.|.||:::|.|||||||||:|:..|...
BPUM_1811___n    200 GMNFLLGKKTTEILGDTRVEGLSFSDGSTLETDLVVMAVGIKPSKMLAEI    249

BSNT_00581___    251 SGIPVNRGIIVNDYMQTEIPHIYAVGECAEHRGIAYGLVAPLYEQAKVLA    300
                     ||:.||:||||||:|:|.:|.|||||||.||||..||||||||:||.|||
BPUM_1811___n    250 SGLEVNKGIIVNDFMETSVPGIYAVGECVEHRGQTYGLVAPLYDQANVLA    299

BSNT_00581___    301 KHICGIETNPYEGSVLSTQLKVSGVEVFSAGDFDESEDKKAIKVFDEQDG    350
                     .|||.:...||:|||:|||||||||:|||||||.|:::|||||:||:|.|
BPUM_1811___n    300 GHICDMNPAPYKGSVMSTQLKVSGVDVFSAGDFIENDEKKAIKIFDDQKG    349

BSNT_00581___    351 IYKKIVLRDNKIVGAVLFGDSSEGNRLFSMIQKEADISETSKISILQPLN    400
                     ||:|:|.:.|::||||:||::|:|.||||.|:|..|:|:..|:|:|.. |
BPUM_1811___n    350 IYQKLVFQQNRLVGAVMFGETSDGPRLFSYIRKGIDMSDKEKVSVLTS-N    398

BSNT_00581___    401 QEAGTSITAAMSDDEIICGCNGVSKGAIIQAIQEKGCSSTDEIKACTGAS    450
                     ..|..|...:||:|.|:|||||||||.|::|||::|.::..|:|.||.||
BPUM_1811___n    399 DPAQESTIESMSNDHIVCGCNGVSKGQIVEAIQKEGLTTLQEVKQCTSAS    448

BSNT_00581___    451 RSCGGCKPLVEEILQHTLGSDFDASAQKEAICGCTTLSRDEVVEEIKAKG    500
                     ||||||||:|||||.||||...:.:||||.||.|||||||||:.|||.||
BPUM_1811___n    449 RSCGGCKPVVEEILWHTLGDGANRTAQKETICACTTLSRDEVIHEIKEKG    498

BSNT_00581___    501 LSHTREVMNVLGWKTPEGCSKCRPALNYYLGMINPTKYEDDRTSRFVNER    550
                     |.|.:|||:||.|:|.||||||||||||||||:.|.:|:|:|:||:||||
BPUM_1811___n    499 LQHIKEVMSVLDWETEEGCSKCRPALNYYLGMLQPLEYKDERSSRYVNER    548

BSNT_00581___    551 MHANIQKDGTYSVVPRMYGGVTNSTDLRKIADVVDKYEIPLVKMTGGQRI    600
                     :||||||||||||||||||||||:.|||||||||||||||||||||||||
BPUM_1811___n    549 LHANIQKDGTYSVVPRMYGGVTNANDLRKIADVVDKYEIPLVKMTGGQRI    598

BSNT_00581___    601 DLIGVKKEDLPKVWEDLDMPSGYAYGKTLRTVKTCVGEQFCRFGTQDSMA    650
                     ||:||||||||||||||||||||||||:||||||||||||||||||||||
BPUM_1811___n    599 DLLGVKKEDLPKVWEDLDMPSGYAYGKSLRTVKTCVGEQFCRFGTQDSMA    648

BSNT_00581___    651 LGIALEKKFEGLNTPHKVKMAVSACPRNCAESGIKDLGVVGIDGGWELYV    700
                     ||||||||||||.||||||:||||||||||||||||||:|||:||:|||.
BPUM_1811___n    649 LGIALEKKFEGLATPHKVKLAVSACPRNCAESGIKDLGIVGIEGGFELYA    698

BSNT_00581___    701 GGNGGTHLRAGDLLMKVKTNEEVLEYAGAYLQYYRETANYLERTSAWLER    750
                     |||||||||||||||||.|.|||.:.|.|||||||||||||||||||:||
BPUM_1811___n    699 GGNGGTHLRAGDLLMKVSTAEEVEQVAAAYLQYYRETANYLERTSAWVER    748

BSNT_00581___    751 VGLSHVQSVLNDPEKRQELNDRMNETLSVHKDPWKDFLEDKQTSKELFEN    800
                     :||.|:||||.|.|||:.|..||:..||.:.:||::..|.::.:|:||:.
BPUM_1811___n    749 LGLDHIQSVLLDDEKREALIQRMDIALSTYDEPWQELRESQKATKQLFQK    798

BSNT_00581___    801 VVTTS---    805
                     ...:.   
BPUM_1811___n    799 ATASVSIN    806


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00581 and BPUM_1811

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
