Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03040 and BPUM_1806
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence pep-align/BSNT_03040___yoeA.1.24716.seq
# -bsequence pep-align/BPUM_1806.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03040___yoeA-BPUM_1806.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03040___yoeA-BPUM_1806.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03040___yoeA
# 2: BPUM_1806
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 464
# Identity: 309/464 (66.6%)
# Similarity: 380/464 (81.9%)
# Gaps: 10/464 ( 2.2%)
# Score: 1630.0
#
#
#=======================================
BSNT_03040___ 1 METSQEPLVTQKKSKPSVWRSMSLFLVPLLLSNVLQSVGQLVGMMAVGRW 50
....:..|:.::||:|||||||||:|||:||||.::.||||
BPUM_1806 1 ---------MTLDNNQSLVKTMSIFLVPLLLSNILQSIGQLVSIVLVGRW 41
BSNT_03040___ 51 LGVDAVAAVSSFFPLFFLLISFTIGIGSGSSILIGQAYGAKNEERLKAVV 100
:|.|||||:|:||||||||:||:||||||||||||||||||||:|||.::
BPUM_1806 42 IGEDAVAAISAFFPLFFLLVSFSIGIGSGSSILIGQAYGAKNEQRLKEII 91
BSNT_03040___ 101 GTTLTFTFLLGVVLAVIGSIFTLDILRLMGTPENVIHVSANYARILFYAM 150
||||:||||:|:.||:||..|..|||.|||||.|::..||.||||||.:|
BPUM_1806 92 GTTLSFTFLIGLSLAIIGGFFATDILNLMGTPANIVEESAAYARILFISM 141
BSNT_03040___ 151 PFMFLYFAYTTFLRGTGDSKTPFYTLIVSTVINIALLPVLILGMFGFPKL 200
|.:||||.||||||||||||||||.|::||..||.:||:|:.|..|.|..
BPUM_1806 142 PILFLYFVYTTFLRGTGDSKTPFYFLMISTATNILMLPILLFGWLGLPAF 191
BSNT_03040___ 201 GIYGSAYATVISTIATFLVLMVYLRKRKHPLQFDKTVRRYLKMDKELLVL 250
|:||:|||:|||||.||.:|.:||.|.||||:.|.:||::|.|..:||..
BPUM_1806 192 GLYGAAYASVISTIVTFTILHIYLYKTKHPLRIDTSVRKHLLMKGDLLKT 241
BSNT_03040___ 251 LLRLGVPASINMILVSLSEIAVISFVNHYGSNATAAYGVVNQVASYVQMP 300
||:|.:|:||||||:||||||||||||.|||.|||||||||||.||||||
BPUM_1806 242 LLKLSIPSSINMILISLSEIAVISFVNDYGSQATAAYGVVNQVVSYVQMP 291
BSNT_03040___ 301 AVSLGIAVSIFAAQSIGANEFDRLKQVIRVGIWLNYIIGGVLIILIYVFS 350
||||||||||||||.|||...:|||.||::|:.||:.|||.:||::|:|:
BPUM_1806 292 AVSLGIAVSIFAAQFIGAGNINRLKDVIKIGLGLNFAIGGFIIIIVYLFA 341
BSNT_03040___ 351 HQILSLFLTEQETLYIAHRLLMITLWSYLLFGNAQIISATMRASGTVLWP 400
.||||:|||:.:|:.||:.|::|||||||:||.|||::||||||||||||
BPUM_1806 342 PQILSIFLTDSKTIDIAYSLVVITLWSYLIFGTAQIVAATMRASGTVLWP 391
BSNT_03040___ 401 TVISIFAIWGVEVPVAFVLSHYTKLEILGVWVGYPAAFAVSLLLIYGYYQ 450
|:.||.:||.||||||:||||||.|.|.|:|:||||||.|:|||.|||||
BPUM_1806 392 TIFSICSIWLVEVPVAYVLSHYTSLGIKGIWIGYPAAFFVNLLLQYGYYQ 441
BSNT_03040___ 451 FVWKKKQITRLIQ- 463
.|||||||..|:|
BPUM_1806 442 LVWKKKQIVALVQS 455
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