Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02075 and BPUM_1801

See DNA alignment / Visit BSNT_02075 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_02075___yjjA.1.24716.seq
#    -bsequence pep-align/BPUM_1801___hemD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02075___yjjA-BPUM_1801___hemD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02075___yjjA-BPUM_1801___hemD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02075___yjjA
# 2: BPUM_1801___hemD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     153/273 (56.0%)
# Similarity:   202/273 (74.0%)
# Gaps:           3/273 ( 1.1%)
# Score: 799.0
# 
#
#=======================================

BSNT_02075___      1 MGKGLLGKRVAIGGSRKTEEISTIIEKQGGIPVIRPLQGTVYLAEKQVEP     50
                     |.|||.||.:||.|:|||||:.|::|||||..|||.|||||:||:::::|
BPUM_1801___h      1 MSKGLSGKTIAICGTRKTEEMRTLVEKQGGQAVIRSLQGTVFLAKEELKP     50

BSNT_02075___     51 DLRTFAEEKADWVIFTTGIGLETLVDMAEKIGLKDEFLQAIRQAKAACRG    100
                     .:.||.::.||||:.|||||.:||::.||::.|.:||:..:..|:.|.||
BPUM_1801___h     51 GIETFVKKGADWVVLTTGIGTDTLIESAEELDLGEEFMHILSNAQIASRG    100

BSNT_02075___    101 YKTLSALKKLGITPEASDEDGTTRGLIRSLEPHDFSGKTVMVQLHGEKAP    150
                     |||.:||||.||.|:.||||||.|.||..||..:|.||.||||||||.||
BPUM_1801___h    101 YKTYAALKKRGIQPDVSDEDGTVRDLIAKLEGKEFQGKRVMVQLHGENAP    150

BSNT_02075___    151 ALMAFLEEKGASVLPILPYQHIPPEEETVEQLCRELMNDEVDAVCFTTAI    200
                     ||:.||.||||.|||:|||||.|||.:..|.|.:|:.:..|.|||||||:
BPUM_1801___h    151 ALIQFLHEKGADVLPLLPYQHTPPEPKAAETLLQEMKDGNVHAVCFTTAV    200

BSNT_02075___    201 QVRSLFDFAKGRGYINEVKKVFEERAIAAAVGKVTAEALREEGITRLLAP    250
                     ||.:.|..|...|...|::.:||:..:|.||||||||||:||||.|:|.|
BPUM_1801___h    201 QVHAFFTLAAKWGRKEELQALFEQHVLAVAVGKVTAEALKEEGIDRILTP    250

BSNT_02075___    251 EIERMGAMIVELAKYYEEKE---    270
                     .:|||||||:||::|.:::.   
BPUM_1801___h    251 SLERMGAMIMELSQYMKKQSSHS    273


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