Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03017 and BPUM_1783

See DNA alignment / Visit BSNT_03017 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_03017.1.24716.seq
#    -bsequence pep-align/BPUM_1783___pycAA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03017-BPUM_1783___pycAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03017-BPUM_1783___pycAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03017
# 2: BPUM_1783___pycAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      48/74 (64.9%)
# Similarity:    61/74 (82.4%)
# Gaps:           4/74 ( 5.4%)
# Score: 250.0
# 
#
#=======================================

BSNT_03017         1 -MTVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVK     49
                      .||:|||||||||:.||.||:::|||||||||||||||||||:.:|.:.
BPUM_1783___p      1 MKTVTIQMAGNLWKLLVKQGDEVQKGQEVAILESMKMEIPIVAEETGFIS     50

BSNT_03017        50 EVKKNEGDFVNEGDVLLELSNSTQ     73
                     :|.|.||:||:||:|||||:.   
BPUM_1783___p     51 KVYKAEGEFVDEGEVLLELTE---     71


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