Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02958 and BPUM_1688

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_02958___yneB.1.24716.seq
#    -bsequence pep-align/BPUM_1688___yneB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02958___yneB-BPUM_1688___yneB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02958___yneB-BPUM_1688___yneB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02958___yneB
# 2: BPUM_1688___yneB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity:     149/217 (68.7%)
# Similarity:   182/217 (83.9%)
# Gaps:           2/217 ( 0.9%)
# Score: 775.0
# 
#
#=======================================

BSNT_02958___      1 MKALIYARVSTNKEQQETSLKRQEEELTAIAAENDMEVVKVISEKASGYE     50
                     |.|:|||||||.||:||||||||||||.|:||.:.|.|||||.||||||:
BPUM_1688___y      1 MNAIIYARVSTVKEEQETSLKRQEEELLALAAMHKMNVVKVIKEKASGYD     50

BSNT_02958___     51 MDRDGVFELLDEIKNAGIDVILVQDETRLGRGNAKIALLHCIYREGVKVY    100
                     :||||||::|..::...||.:|:|||||||||.||||||||:::|.||||
BPUM_1688___y     51 LDRDGVFDMLATLREKSIDAVLIQDETRLGRGQAKIALLHCLFKENVKVY    100

BSNT_02958___    101 TTAHRGELELSEADSMVLEIVSIVEEYQRKIHNMKIRRGMKRAVKNGFKP    150
                     :|.|||||||||||.||:|||.:||||||||||:||:|||:|||:.|::|
BPUM_1688___y    101 STFHRGELELSEADEMVIEIVGVVEEYQRKIHNLKIKRGMRRAVEGGYQP    150

BSNT_02958___    151 QKNLKNQHGNSGKEKIEVPISEIVRLRANKLTFAEIAATLRGFGYDVSKA    200
                     :.|||.|....|:|:||||||||||||.|.:|||||||||:..|:|:|||
BPUM_1688___y    151 ELNLKQQDHAPGRERIEVPISEIVRLRKNNMTFAEIAATLQALGFDISKA    200

BSNT_02958___    201 TVHRRFQEYIENEETAE    217
                     |||||:|||.:...|  
BPUM_1688___y    201 TVHRRYQEYEKGLIT--    215


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