Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03166 and BPUM_1683

See DNA alignment / Visit BSNT_03166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_03166___yojH.1.24716.seq
#    -bsequence pep-align/BPUM_1683___yojH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03166___yojH-BPUM_1683___yojH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03166___yojH-BPUM_1683___yojH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03166___yojH
# 2: BPUM_1683___yojH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     134/282 (47.5%)
# Similarity:   191/282 (67.7%)
# Gaps:           0/282 ( 0.0%)
# Score: 688.0
# 
#
#=======================================

BSNT_03166___      1 MAKNKKLFEYLSQHAETISSTWYETIEETDPNSIYASTDPVVIHNLKSQN     50
                     |.||:.|::|..||||.::.|||::||:.||.|||.|||..:|..||.||
BPUM_1683___y      1 MDKNRALYDYFMQHAEKLTETWYDSIEDDDPESIYRSTDSSIISELKRQN     50

BSNT_03166___     51 LAFNYKINRIFIDDEDVYLPILKEWAFEVTQDQEHLKTPIHYIIREFVRV    100
                     ..:.....|..|:|:.......|:|:.::..|.:||.||:.|::||::..
BPUM_1683___y     51 QDYYQHFIRALIEDKTYLHTEFKKWSEDLASDPKHLNTPLDYVVREYMSN    100

BSNT_03166___    101 RDLYVSYVKEFVHLNQDTVKSEEAEDLYHALIKAFDLVIHIFIEEMYKNT    150
                     :.:.:.|:|||:...||.:..:.....|..:.:||::.||:||::..|||
BPUM_1683___y    101 QRVVLHYLKEFIKQRQDDIDIDRIFYWYDLISEAFNISIHVFIQQYVKNT    150

BSNT_03166___    151 SLQLQAQKDMITELSAPVIVLFHSVGLLPLIGDIDTVRAKLIMENTLHQC    200
                     :.:|.||:|||.|||:|||||...:.||||:|||||.|||:|:||||.||
BPUM_1683___y    151 TKKLVAQRDMIYELSSPVIVLKSHIALLPLVGDIDTARAKIILENTLKQC    200

BSNT_03166___    201 AKKKVTQLYIDLSGVAVIDTMVAHQLFSLIEALRLIGVSSTLSGIRPEIA    250
                     ::|.|..|.||||||.:||||||.|:|.|:.:||||||.:|:||||||||
BPUM_1683___y    201 SQKGVQHLCIDLSGVVIIDTMVAQQIFDLVTSLRLIGVETTISGIRPEIA    250

BSNT_03166___    251 QTAVQLGLSFEGISLRSTLASAIASDLKLKKV    282
                     ||||||||.|......::||.|:....:...:
BPUM_1683___y    251 QTAVQLGLPFNEFRTAASLAHALERMTEFSPI    282


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