Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02717 and BPUM_1578
See
DNA alignment /
Visit
BSNT_02717 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_02717___spoVFB.1.24716.seq
# -bsequence pep-align/BPUM_1578___spoVFB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02717___spoVFB-BPUM_1578___spoVFB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02717___spoVFB-BPUM_1578___spoVFB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02717___spoVFB
# 2: BPUM_1578___spoVFB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 164/200 (82.0%)
# Similarity: 186/200 (93.0%)
# Gaps: 3/200 ( 1.5%)
# Score: 867.0
#
#
#=======================================
BSNT_02717___ 1 MSSLKGKRIGFGLTGSHCTYEAVFPQIEALVNEGAEVRPVVTFNVKSTNT 50
|::||||||||||||||||||||:|||||||.|||||||||::.|::|||
BPUM_1578___s 1 MTTLKGKRIGFGLTGSHCTYEAVYPQIEALVKEGAEVRPVVSYTVQNTNT 50
BSNT_02717___ 51 RFGEGAEWVKKIEDLTGYEAIDSIVKAEPLGPKLPLDCMVIAPLTGNSMS 100
|||:||:|:::||.|||::||||||||||||||||||||||||||||||:
BPUM_1578___s 51 RFGDGADWIERIEKLTGFKAIDSIVKAEPLGPKLPLDCMVIAPLTGNSMA 100
BSNT_02717___ 101 KLANAMTDSPVLMAAKATIRNNRPVVLGISTNDALGLNGTNLMRLMSTKN 150
|.|||||||||||||||||||:||||||||||||||||||||||||||||
BPUM_1578___s 101 KFANAMTDSPVLMAAKATIRNHRPVVLGISTNDALGLNGTNLMRLMSTKN 150
BSNT_02717___ 151 IFFIPFGQDDPFKKPNSMVAKMDLLPQTIEKALMHQQLQPILVENYQGND 200
|||||||||||||||.||||.||||.||:|:||.|:|:||||:...:
BPUM_1578___s 151 IFFIPFGQDDPFKKPTSMVANMDLLSQTVEEALEHRQIQPILIGPSE--- 197
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.