Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02696 and BPUM_1556

See DNA alignment / Visit BSNT_02696 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence pep-align/BSNT_02696___proS.1.24716.seq
#    -bsequence pep-align/BPUM_1556___proS1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02696___proS-BPUM_1556___proS1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02696___proS-BPUM_1556___proS1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02696___proS
# 2: BPUM_1556___proS1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 565
# Identity:     433/565 (76.6%)
# Similarity:   498/565 (88.1%)
# Gaps:           1/565 ( 0.2%)
# Score: 2290.0
# 
#
#=======================================

BSNT_02696___      1 MRQSLTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVI     50
                     ||||||.|||||||||||||||||||:|||||||||||:|.|:|||:|||
BPUM_1556___p      1 MRQSLTFIPTLREVPADAEAKSHQLLVRAGFIRQNTSGIYHYLPLAHKVI     50

BSNT_02696___     51 QNIQQIVREEMEKIDAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRH    100
                     |:||.|||:||||..|.|:|||.|||||.||||||||||||||||:||||
BPUM_1556___p     51 QHIQSIVRKEMEKAGAAELLMPVLQQAEMWQESGRWYTYGPELMRMKDRH    100

BSNT_02696___    101 GREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLL    150
                     |||||||.|||||||||||.||||||:|||||||||||||||:|||||||
BPUM_1556___p    101 GREFALGPTHEEVITSLVRSEVKSYKKLPLTLYQIQSKFRDEQRPRFGLL    150

BSNT_02696___    151 RGREFIMKDAYSFHASAESLDETYQKMYEAYSNIFARCGINVRPVIADSG    200
                     ||||||||||||||:|.||||:||.||:.||||:|::.|:|.||||||||
BPUM_1556___p    151 RGREFIMKDAYSFHSSPESLDDTYNKMFTAYSNVFSKVGLNFRPVIADSG    200

BSNT_02696___    201 AMGGKDTHEFMALSAIGEDTIAYSDESQYAANIEMAEVLHQ-EVPSDEEP    249
                     ||||||||||||||.:|||||||||.|.|||||||||.::| |..:..:.
BPUM_1556___p    201 AMGGKDTHEFMALSEVGEDTIAYSDTSSYAANIEMAEAVYQGEEANPADF    250

BSNT_02696___    250 KALEKVHTPNVKTIEELTAFLQVSAEACIKSVLFKADDRFVLVLVRGDHE    299
                     |.|||||||.||||:::..||.|....|||||||||||.:||:|.|||||
BPUM_1556___p    251 KELEKVHTPQVKTIQDIAGFLDVDPSLCIKSVLFKADDAYVLILTRGDHE    300

BSNT_02696___    300 VNDIKVKNLLHAEVVELATHEEVIQQLGTEPGFVGPVGIHQDVEVYADQA    349
                     |||:|||||:.|::|||||.|||::.:||||||||||.:..:|::|||..
BPUM_1556___p    301 VNDVKVKNLVGAQLVELATREEVLEVIGTEPGFVGPVKLEAEVDIYADLT    350

BSNT_02696___    350 VKAMVNAVAGANEGDHHYKNVNVNRDAQIKEFADLRFIKEGDPSPDGKGT    399
                     ||.|.||||||||.|:||.|||..||..:|||.|||||:|||.||||:||
BPUM_1556___p    351 VKGMTNAVAGANEADYHYVNVNPARDVSVKEFTDLRFIQEGDVSPDGEGT    400

BSNT_02696___    400 IRFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTL    449
                     |:||:||||||||||||||||:|:|||||||||||||:|||||||:||||
BPUM_1556___p    401 IQFAKGIEVGQVFKLGTRYSESMDATYLDENGRAQPMIMGCYGIGISRTL    450

BSNT_02696___    450 SAIAEQHHDEKGLIWPKSVAPYDLHILALNMKNDGQRELAEKLYADLKAE    499
                     |||.||||||||:|||::|||||||:||||||||.|:||||.||..|:.|
BPUM_1556___p    451 SAIVEQHHDEKGIIWPEAVAPYDLHLLALNMKNDAQKELAETLYERLENE    500

BSNT_02696___    500 GYEVLYDDRAERAGVKFADSDLIGLPIRITVGKRADEGIVEVKIRQTGES    549
                     |::||:|||.|||||||||||||||||||:.|||::|||||||.|::|||
BPUM_1556___p    501 GFDVLFDDRQERAGVKFADSDLIGLPIRISCGKRSEEGIVEVKFRKSGES    550

BSNT_02696___    550 TEISVDELSAFISKQ    564
                     .|:|||||.:||.:.
BPUM_1556___p    551 HEVSVDELISFIRQA    565


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02696 and BPUM_1556

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
