Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02650 and BPUM_1524
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence pep-align/BSNT_02650___ylxF.1.24716.seq
# -bsequence pep-align/BPUM_1524___ylxF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02650___ylxF-BPUM_1524___ylxF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02650___ylxF-BPUM_1524___ylxF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02650___ylxF
# 2: BPUM_1524___ylxF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 95/236 (40.3%)
# Similarity: 145/236 (61.4%)
# Gaps: 36/236 (15.3%)
# Score: 428.5
#
#
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BSNT_02650___ 1 --MSGKKKES--GKFRSVLLIIILPLMFLLIAGGIVLWAAGINVIKPIQD 46
...|.||| |||:.:|.|:|:||:.|::..|.:|:.||.::.||:|:
BPUM_1524___y 1 MPKKEKTKESSGGKFQWILFIVIIPLIVLVLVTGTILYMAGFDLKKPLQN 50
BSNT_02650___ 47 AAAKTPVLKELVPETENKKGAASSKDSSNTAA--LEKTIKDQKSEISILN 94
.|.:..||...:..|.::|..:.|:... |:||||:||:|:.|..
BPUM_1524___y 51 ----IPGVSSLVGSDDTPKTSSSHNNQSDAEVNELKKTIKEQKNELEIAQ 96
BSNT_02650___ 95 KDLETSKSEIDRLNQKIRSLEKTAED--QKKSSEDHTEGSADSKASSEND 142
|||:||..||.||||||.|||||:|: ..|||.|.:..::.|..:|.|:
BPUM_1524___y 97 KDLKTSDEEIKRLNQKISSLEKTSENDANNKSSNDSSSNNSSSSDTSSNN 146
BSNT_02650___ 143 ------------------KVISVYKSMDSGKAAKIIAQLKEQEALKILNG 174
|:.|:|:|||:||:|||:::|.::||||||..
BPUM_1524___y 147 ASGTTSDGAAASNQKPKGKIASIYESMDAGKSAKILSELSDKEALKILEE 196
BSNT_02650___ 175 LSKKQLADILAKMTPEQAATYTEKIAASQE------ 204
|||.:|.|||||:||::|||:|:::|..:.
BPUM_1524___y 197 LSKNKLTDILAKLTPQKAATFTKELAKKESENGGGQ 232
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