Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02589 and BPUM_1475

See DNA alignment / Visit BSNT_02589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence pep-align/BSNT_02589___prpC.1.24716.seq
#    -bsequence pep-align/BPUM_1475___prpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02589___prpC-BPUM_1475___prpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02589___prpC-BPUM_1475___prpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02589___prpC
# 2: BPUM_1475___prpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     164/256 (64.1%)
# Similarity:   206/256 (80.5%)
# Gaps:           2/256 ( 0.8%)
# Score: 885.0
# 
#
#=======================================

BSNT_02589___      1 --MLTALKTDTGKIRQHNEDDAGIFKGKDEFILAVVADGMGGHLAGDVAS     48
                       :..|..|||||:|||||||||||:.|::.:||||||||||||||||||
BPUM_1475___p      1 MLIRAAFLTDTGKVRQHNEDDAGIFEAKEDSLLAVVADGMGGHLAGDVAS     50

BSNT_02589___     49 KMAVKAMGEKWNEAETIPTAPSECEKWLIEQILSVNSKIYDHAQAHEECQ     98
                     ||||.::.|.|.|..:||..|::.|.|||.:|..:|.::|:|||.:||||
BPUM_1475___p     51 KMAVSSLKEYWEETSSIPEKPADQESWLISKISDINDQVYEHAQNNEECQ    100

BSNT_02589___     99 GMGTTIVCALFTGKTVSVAHIGDSRCYLLQDDDFVQVTEDHSLVNELVRT    148
                     ||||||||||...:||::|||||||||||::....|:|:|||||||||:|
BPUM_1475___p    101 GMGTTIVCALVHLQTVTIAHIGDSRCYLLREGALTQLTDDHSLVNELVKT    150

BSNT_02589___    149 GEISREDAEHHPRKNVLTKALGTDQSVSIDTRSFDIEPGDKLLLCSDGLT    198
                     ||||:.|||:||||||||||||||:.|.||.|:|:::|||::|||||||:
BPUM_1475___p    151 GEISKADAEYHPRKNVLTKALGTDKRVQIDARTFEVDPGDQILLCSDGLS    200

BSNT_02589___    199 NKVEGTELKDILQSDSAPQEKVNLLVDKANQNGGEDNITAVLLELALQVE    248
                     ||||...|..||...:||:|||..|:..||.|||||||||||||::.|.|
BPUM_1475___p    201 NKVEEENLIHILTQTTAPEEKVTELIQTANDNGGEDNITAVLLEISSQPE    250

BSNT_02589___    249 EGEDQC    254
                     ||:.:|
BPUM_1475___p    251 EGDSKC    256


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