Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02552 and BPUM_1445

See DNA alignment / Visit BSNT_02552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_02552___ylyB.1.24716.seq
#    -bsequence pep-align/BPUM_1445___ylyB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02552___ylyB-BPUM_1445___ylyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02552___ylyB-BPUM_1445___ylyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: BPUM_1445___ylyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     249/304 (81.9%)
# Similarity:   274/304 (90.1%)
# Gaps:           1/304 ( 0.3%)
# Score: 1339.0
# 
#
#=======================================

BSNT_02552___      1 MNQIDITASEEQKSERIDKFLASSENDWSRTQVQQWVKDGQVVVNGSAVK     50
                     |||::|..||||.|||:||||::||.:|||||||||||||.:.|||..||
BPUM_1445___y      1 MNQVNIAVSEEQTSERLDKFLSTSEPEWSRTQVQQWVKDGLIEVNGKQVK     50

BSNT_02552___     51 ANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVV    100
                     ||||:|.|||:.|.:||||||||.||.|||||||||.|||||||||||||
BPUM_1445___y     51 ANYKVQAGDQIKVEIPEPEALDVEAEAMDLDIYYEDADVLVVNKPRGMVV    100

BSNT_02552___    101 HPAPGHLTGTLVNGLMAHCTDLSGINGVMRPGIVHRIDKDTSGLLMVAKN    150
                     ||||||::||||||||||||||||||||||||||||||||||||||||||
BPUM_1445___y    101 HPAPGHVSGTLVNGLMAHCTDLSGINGVMRPGIVHRIDKDTSGLLMVAKN    150

BSNT_02552___    151 DMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMT    200
                     ||||||||||||.|||||||||||||:|.||.||||||||||||||||||
BPUM_1445___y    151 DMAHESLVNQLVAKTVTRKYTAVVHGIIQHDTGTIDAPIGRDKKDRQSMT    200

BSNT_02552___    201 VTRD-GKSAVTHFHVLERFQDFTLVECQLETGRTHQIRVHMRYIGFPLAG    249
                     ||:: .|.|||||.|:|||.|||:|||:|||||||||||||:|||:||||
BPUM_1445___y    201 VTKESSKQAVTHFDVIERFDDFTVVECRLETGRTHQIRVHMKYIGYPLAG    250

BSNT_02552___    250 DPKYGPRKTIDFNGQALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENL    299
                     |||||||||:|||||.||||||||||||||||:||.||:|.||...|::|
BPUM_1445___y    251 DPKYGPRKTVDFNGQLLHAGVLGFDHPRTGEYIEFTAPVPADMRGFIDSL    300

BSNT_02552___    300 RKNG    303
                     |.|.
BPUM_1445___y    301 RNND    304


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