Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02540 and BPUM_1438

See DNA alignment / Visit BSNT_02540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_02540___ylmF.1.24716.seq
#    -bsequence pep-align/BPUM_1438___ylmF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02540___ylmF-BPUM_1438___ylmF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02540___ylmF-BPUM_1438___ylmF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02540___ylmF
# 2: BPUM_1438___ylmF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     122/152 (80.3%)
# Similarity:   137/152 (90.1%)
# Gaps:           1/152 ( 0.7%)
# Score: 620.0
# 
#
#=======================================

BSNT_02540___      1 MSMKNKLKNFFSMEDEEYEYEYIETERES-HEEHEQKEKPAYTGNKPSGK     49
                     ||:|||.|:||:::|||||||||:.|||. .||...|:|.|:.....:||
BPUM_1438___y      1 MSIKNKFKSFFTLDDEEYEYEYIDEEREPVQEEKGTKDKAAFQERPQTGK     50

BSNT_02540___     50 QNVVSLQSVQKSSKVVLSEPRVYAEAQEIADHLKNRRAVVVNLQRIQHDQ     99
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
BPUM_1438___y     51 QNVVSLQSVQKSSKVVLSEPRVYAEAQEIADHIKNRRAVVVNLQRIQHDQ    100

BSNT_02540___    100 AKRIVDFLSGTVYAIGGDIQRIGSDIFLCTPDNVDVSGTISELISEDEHQ    149
                     ||||:|||||||||||||||||||:||||||||||||||||||::|:|.|
BPUM_1438___y    101 AKRIIDFLSGTVYAIGGDIQRIGSNIFLCTPDNVDVSGTISELLTEEEPQ    150

BSNT_02540___    150 RW    151
                     ||
BPUM_1438___y    151 RW    152


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