Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02531 and BPUM_1426

See DNA alignment / Visit BSNT_02531 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_02531___sigE.1.24716.seq
#    -bsequence pep-align/BPUM_1426___sigE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02531___sigE-BPUM_1426___sigE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02531___sigE-BPUM_1426___sigE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02531___sigE
# 2: BPUM_1426___sigE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     224/239 (93.7%)
# Similarity:   233/239 (97.5%)
# Gaps:           0/239 ( 0.0%)
# Score: 1135.0
# 
#
#=======================================

BSNT_02531___      1 MKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMK     50
                     |||:|.:||:.||||||||||||||:|||||||||||||||||||.||:|
BPUM_1426___s      1 MKKIKFKLTYYWYKLLMKLGLKSDEIYYIGGSEALPPPLSKDEEQELLVK     50

BSNT_02531___     51 LPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVN    100
                     ||.|||.|||||||||||||||||||||||||||||||||||||||||||
BPUM_1426___s     51 LPKGDQTARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVN    100

BSNT_02531___    101 TFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEVSFDEPLNIDWDGNE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1426___s    101 TFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEVSFDEPLNIDWDGNE    150

BSNT_02531___    151 LLLSDVLGTDDDIITKDIEANVDKKLLKKALEQLNEREKQIMELRFGLVG    200
                     |||||||||||||||:|||||||||||||||||||:||||||||||||||
BPUM_1426___s    151 LLLSDVLGTDDDIITRDIEANVDKKLLKKALEQLNDREKQIMELRFGLVG    200

BSNT_02531___    201 EEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV    239
                     .|||||||||||:||||||||||||||||||:|||||||
BPUM_1426___s    201 GEEKTQKDVADMLGISQSYISRLEKRIIKRLQKEFNKMV    239


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