Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02496 and BPUM_1399
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_02496___ylbM.1.24716.seq
# -bsequence pep-align/BPUM_1399___ylbM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02496___ylbM-BPUM_1399___ylbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02496___ylbM-BPUM_1399___ylbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02496___ylbM
# 2: BPUM_1399___ylbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 242/416 (58.2%)
# Similarity: 308/416 (74.0%)
# Gaps: 3/416 ( 0.7%)
# Score: 1247.0
#
#
#=======================================
BSNT_02496___ 1 MKAVGLVVEYNPFHNGHLYHAQTAKRQTGCDTAVAVMSGHFLQRGEPAVV 50
|||.|:||||||||.||.||.:.||..|..|.|:|||||.||||||||:|
BPUM_1399___y 1 MKATGVVVEYNPFHYGHAYHVRQAKIHTSSDVAIAVMSGSFLQRGEPAIV 50
BSNT_02496___ 51 SKWARTKMALQSGVDLVIELPYLYAVQKADIFARGSVSILNELECKALFF 100
|||||||||||:|||:|.||||:||||||:.||.|:|:||:.|:|.:|||
BPUM_1399___y 51 SKWARTKMALQNGVDIVCELPYIYAVQKAETFANGAVAILDALKCHSLFF 100
BSNT_02496___ 101 GSENGDIKPFLETAQLIGEHKHTFDDRIKEELKTGTSYPAAAASAFSSIL 150
|||:||||.|..||....|.|...|...||::|.|.|||.|||:||..::
BPUM_1399___y 101 GSEDGDIKAFERTAHAWHEKKEEIDLFTKEKVKKGLSYPTAAAAAFQEVI 150
BSNT_02496___ 151 HTESALDLSKPNNILGYQYVTSVLTGGYPMKPYTTARISSDYHDADLPEG 200
..:..||||.||||||:.||.:::.....|:|:|:.||||.|||.:|||.
BPUM_1399___y 151 DPKHLLDLSLPNNILGFHYVKAIMERSPHMQPFTSQRISSGYHDEELPEN 200
BSNT_02496___ 201 ENHIASATSIRKAMTGQ-NLEACLRFLPAASARELAAYRKSFGLWHTPES 249
:. ||||||||||:... ..|....:||.|:.::|..|..|:||.||.|:
BPUM_1399___y 201 QK-IASATSIRKALKDHGTFETVAPYLPEATLKQLHDYHSSYGLLHTQEA 249
BSNT_02496___ 250 YFSYLKYSLSTVTAQELQQVYEVEEGLEHRILRSIRKSSSYQEFMELLKT 299
|||:||:...|:...||:.:||:|||:|||:.::|..:|||:|::.|:||
BPUM_1399___y 250 YFSFLKHVFHTMDMAELEGIYEIEEGIEHRMQKAITHASSYEEYLSLVKT 299
BSNT_02496___ 300 KRYTWTRLQRMNTHILTRTKKQDMQKLLDNDKAPYIRLLGMTKKGQAYLS 349
||||||||||||||:|.|.||..|.:||...||||||||||:||||.|||
BPUM_1399___y 300 KRYTWTRLQRMNTHLLMRVKKSAMHELLKEKKAPYIRLLGMSKKGQQYLS 349
BSNT_02496___ 350 EKKKALSVPLVSKLSSFSHPALDLDVKASRIYSLPIEEPLRTEFDLQEYG 399
..||.|.||||||||:|||||||||::|||::|||:.||::|.....|:.
BPUM_1399___y 350 RVKKDLDVPLVSKLSAFSHPALDLDIRASRVFSLPVSEPVQTNLTEAEFK 399
BSNT_02496___ 400 HAPIRYDEDEQHFLNV 415
.:||||||:...|.:
BPUM_1399___y 400 TSPIRYDEETGLFQS- 414
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