Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02486 and BPUM_1390

See DNA alignment / Visit BSNT_02486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02486___ylbE.1.24716.seq
#    -bsequence pep-align/BPUM_1390___ylbE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02486___ylbE-BPUM_1390___ylbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02486___ylbE-BPUM_1390___ylbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02486___ylbE
# 2: BPUM_1390___ylbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      52/82 (63.4%)
# Similarity:    71/82 (86.6%)
# Gaps:           3/82 ( 3.7%)
# Score: 301.0
# 
#
#=======================================

BSNT_02486___      1 MRKEVQEYILANEERKRFIREQPIWYRRLSRKPDDLSSFQLEMMNFYEKT     50
                     |||:|||:::|.|||.:|||::|:|||:|:|.||.||||:|:.|||||||
BPUM_1390___y      1 MRKDVQEFVMAEEERIKFIRQRPLWYRQLTRHPDKLSSFELDKMNFYEKT     50

BSNT_02486___     51 IPHRVNQFTNGIQMAQMMMQMFQAMRTKD---     79
                     |||||:|.:|.:|||:||:|||||||.::   
BPUM_1390___y     51 IPHRVSQLSNSVQMAEMMIQMFQAMRNQNGAG     82


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