Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02483 and BPUM_1388
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence pep-align/BSNT_02483___ylbC.1.24716.seq
# -bsequence pep-align/BPUM_1388___ylbC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02483___ylbC-BPUM_1388___ylbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02483___ylbC-BPUM_1388___ylbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02483___ylbC
# 2: BPUM_1388___ylbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 248/348 (71.3%)
# Similarity: 297/348 (85.3%)
# Gaps: 3/348 ( 0.9%)
# Score: 1329.0
#
#
#=======================================
BSNT_02483___ 1 MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRI 50
||.:|:.::|||||.|||||||||||.|||: |.:||:|||||..|.|.|
BPUM_1388___y 1 MKTVLKTLLILLIISGTYVLFIQYGSSPEKE-NSNEPKVSNEETSSDKPI 49
BSNT_02483___ 51 HMPTSGLLSFMGKPADEVTKKLGEPERIDPSAYDYDWWVYNQGKDQYIQI 100
::|..||:|||||.::||.|:||||:||||||||||||:|||.|..|||:
BPUM_1388___y 50 NIPKKGLMSFMGKSSNEVLKQLGEPDRIDPSAYDYDWWIYNQSKKHYIQV 99
BSNT_02483___ 101 GVLNNKVVTLFASGNDINAKPFKIGESTGEVFKTTQVAPFVNVEYKGNSY 150
||.::|||||||:|:.:|.:|||||::|.||||.||:||:::||.:.|||
BPUM_1388___y 100 GVKDSKVVTLFATGDGLNVEPFKIGQATSEVFKKTQIAPYIHVEDEQNSY 149
BSNT_02483___ 151 RFEFSEEDINTRPTVKV-GKMYVQLYMDKFEGKLSSIRAFDAQTFVKQRP 199
||||||:|:|||||||| ..:||||||||||..|||||||:|.|||||:|
BPUM_1388___y 150 RFEFSEDDMNTRPTVKVDDDVYVQLYMDKFESTLSSIRAFNADTFVKQKP 199
BSNT_02483___ 200 YEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVKHGLAKLEWD 249
|||||||:||:|:|:|.||||:|:.:|:|||.|:||:||.|:.|..|.||
BPUM_1388___y 200 YEVVYRGQLIEPEAISGEKWKEIEASSQKQIFDMTNIIRHKYKLPILNWD 249
BSNT_02483___ 250 QPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAY 299
..|:||||.||||||||:||||.|||||:||||||.|.|.||.|||||||
BPUM_1388___y 250 DETSEVAFMHSEDMKENHYFSHESKKYGTLKDRLERGEVAFQLAGENIAY 299
BSNT_02483___ 300 NYVDGPAAVEGWLNSEGHRKALLNSDYTHLGVGVDRKYYTQNFIKRW- 346
||||||||||||||||||||||||.|||||||||..|||||||||:.
BPUM_1388___y 300 NYVDGPAAVEGWLNSEGHRKALLNKDYTHLGVGVKEKYYTQNFIKKTS 347
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