Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02478 and BPUM_1384

See DNA alignment / Visit BSNT_02478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_02478___ctaF.1.24716.seq
#    -bsequence pep-align/BPUM_1384___ctaF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02478___ctaF-BPUM_1384___ctaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02478___ctaF-BPUM_1384___ctaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02478___ctaF
# 2: BPUM_1384___ctaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      77/110 (70.0%)
# Similarity:    92/110 (83.6%)
# Gaps:           1/110 ( 0.9%)
# Score: 422.0
# 
#
#=======================================

BSNT_02478___      1 MVDKKSRGHINSDLEFKKKKHTREMKYQVLSFGLMIGLTIVAFLTVATDG     50
                      :..|:......||.::|||:..|||:|::|||||||||.|||||:|::.
BPUM_1384___c      1 -MGNKNTNQSKVDLVYRKKKNAEEMKHQLISFGLMIGLTFVAFLTIASED     49

BSNT_02478___     51 VGSWFTIPFIILLAAIQVIFQLYYFMHMNQKGHEAPALFLYSGVFVAFIT    100
                     ||:||.:|||:|||.|||.|||||||||||||||.|||||||||||||||
BPUM_1384___c     50 VGNWFAVPFILLLAVIQVAFQLYYFMHMNQKGHETPALFLYSGVFVAFIT     99

BSNT_02478___    101 VLAFVTIIWW    110
                     ||||:|||||
BPUM_1384___c    100 VLAFLTIIWW    109


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