Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02472 and BPUM_1380

See DNA alignment / Visit BSNT_02472 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence pep-align/BSNT_02472___ctaB.1.24716.seq
#    -bsequence pep-align/BPUM_1380___ctaB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02472___ctaB-BPUM_1380___ctaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02472___ctaB-BPUM_1380___ctaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02472___ctaB
# 2: BPUM_1380___ctaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     241/305 (79.0%)
# Similarity:   271/305 (88.9%)
# Gaps:           0/305 ( 0.0%)
# Score: 1283.0
# 
#
#=======================================

BSNT_02472___      1 MANSRILNDTAIDGQIEETTAWKDFLSLIKIGIVNSNLITTFTGMWLALH     50
                     ||||:...:.||.||||:||||||||:|||:||||||.||||||||||.:
BPUM_1380___c      1 MANSKTAAEAAIHGQIEKTTAWKDFLALIKMGIVNSNFITTFTGMWLAFY     50

BSNT_02472___     51 ISGLSFLGNINTVLLTLIGSSLIIAGSCAINNWYDRDIDHLMERTKVRPT    100
                     .:|:|||||::.||||:|||||||||||||||.:|||||.||||||.|||
BPUM_1380___c     51 FTGMSFLGNLDIVLLTMIGSSLIIAGSCAINNAFDRDIDILMERTKTRPT    100

BSNT_02472___    101 VTGKIQPSQALWSGILLVALGLIMLLMTTVMAAVIGFIGVFTYVVLYTMW    150
                     |||||||.||...|||||.|||||||||||.:|||||||||||.||||||
BPUM_1380___c    101 VTGKIQPGQAYAFGILLVVLGLIMLLMTTVTSAVIGFIGVFTYAVLYTMW    150

BSNT_02472___    151 TKRRYTINTVVGSVSGAVPPLIGWTAVEGNIGVVAWVLFMILFIWQIPHF    200
                     :||.||||||:||||||||||||||||.|.|...|||||||:||||||||
BPUM_1380___c    151 SKRHYTINTVIGSVSGAVPPLIGWTAVTGTIDTTAWVLFMIMFIWQIPHF    200

BSNT_02472___    201 LALAIKKTEDYRAANIPMLPVVYGFEVTKRQIIVWVACLMPLPFFLGSLG    250
                     |:||||||||||.|.||||||||||||||||||:|.|||:|||||||.||
BPUM_1380___c    201 LSLAIKKTEDYRKAGIPMLPVVYGFEVTKRQIIIWTACLLPLPFFLGGLG    250

BSNT_02472___    251 LPIVILGLLLNIGWLILGLMGFRSKNIMKWATQMFVYSLNYMTIYFVAMV    300
                     .|||.||.|||||||::|||||:.|::|||:|.||||||||:||:||||:
BPUM_1380___c    251 WPIVALGTLLNIGWLVIGLMGFKMKDVMKWSTLMFVYSLNYLTIFFVAMI    300

BSNT_02472___    301 VLTLF    305
                     ::|||
BPUM_1380___c    301 IITLF    305


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