Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02438 and BPUM_1363

See DNA alignment / Visit BSNT_02438 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence pep-align/BSNT_02438___yktB.1.24716.seq
#    -bsequence pep-align/BPUM_1363.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02438___yktB-BPUM_1363.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02438___yktB-BPUM_1363.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02438___yktB
# 2: BPUM_1363
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity:     154/212 (72.6%)
# Similarity:   179/212 (84.4%)
# Gaps:           1/212 ( 0.5%)
# Score: 839.0
# 
#
#=======================================

BSNT_02438___      1 MTQMRFTEEDFNTFTIEGLDARMEVLKETVRPKLTALGEHFAPTLSALTG     50
                     |::|||.:|||.|||::|||.||.||||.|||||.||||||||.||::||
BPUM_1363          1 MSEMRFRDEDFETFTVDGLDERMTVLKERVRPKLEALGEHFAPLLSSITG     50

BSNT_02438___     51 DEMFPHVAKHARRSVNPPADSWVAFANSKRGYKKLPHFQIGLWESHVFVW    100
                     ||||.|||||||||||||.|:||||||||||||||||||||||::|||||
BPUM_1363         51 DEMFVHVAKHARRSVNPPNDTWVAFANSKRGYKKLPHFQIGLWKTHVFVW    100

BSNT_02438___    101 FAIIYESPIKEEYGKLLEMNQETITKNIPDSFVWSADHTKPGVHKQSEMD    150
                     ||:|||||:|.|||:|.|...:||.|.||..||||.||.||.|.:.||:|
BPUM_1363        101 FALIYESPVKGEYGQLFEKELDTIQKKIPQDFVWSKDHMKPDVMRHSELD    150

BSNT_02438___    151 KEQLKTLFERLQTVKKAELLCGIQLQKEEVLNMNNQEFLQRIDDAFKQLA    200
                     .|||||||||:||||||||||||||.:|||:.|||:|||.:|:|||:.:.
BPUM_1363        151 AEQLKTLFERVQTVKKAELLCGIQLPREEVVQMNNEEFLSKIEDAFRTVT    200

BSNT_02438___    201 FLYRLTQKVSQA    212
                     :|||.|||.|. 
BPUM_1363        201 YLYRFTQKQSV-    211


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