Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02409 and BPUM_1341
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence pep-align/BSNT_02409___ampS.1.24716.seq
# -bsequence pep-align/BPUM_1341___ampS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02409___ampS-BPUM_1341___ampS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02409___ampS-BPUM_1341___ampS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02409___ampS
# 2: BPUM_1341___ampS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity: 293/410 (71.5%)
# Similarity: 346/410 (84.4%)
# Gaps: 0/410 ( 0.0%)
# Score: 1571.0
#
#
#=======================================
BSNT_02409___ 1 MDSFSQKLNTYAQLAVEVGVNVQKGQYVVVNASTDVRDFVRLIVKHAYEK 50
|.||.::|:.||:..|||||||||.|.|||:|||:..|.|||:.|||||:
BPUM_1341___a 1 MSSFEKQLDQYAKTIVEVGVNVQKEQEVVVSASTESADLVRLVAKHAYER 50
BSNT_02409___ 51 GAKNVTVNWQDDEVAKLKYELAPFEAFEEYPEWEAKGREELAKNGAAFIS 100
|||||.:.|.|..:|:||||.||.:.||::|||||:..|.:||.|.|||:
BPUM_1341___a 51 GAKNVHIRWSDGVLARLKYEHAPQDVFEQFPEWEAQMMETIAKRGGAFIT 100
BSNT_02409___ 101 VVSSNPDLLKGIDSKRIAAFQKAAGKALHTYRQYIQSDKVSWTVVGAASA 150
::|.:||||:|||||:|||.|||||.||||||||:|||||:||||||||.
BPUM_1341___a 101 ILSESPDLLRGIDSKKIAAQQKAAGSALHTYRQYVQSDKVAWTVVGAASK 150
BSNT_02409___ 151 GWAHKVFPGKSEEEAIHLLWEEIFKATRVNEDNPVQAWINHDQNLHEKVD 200
.||.|:||.:::||||.|||::|||..|.::.:||:||..||::|:|||.
BPUM_1341___a 151 DWAKKIFPDQTDEEAIALLWDQIFKVARADQADPVEAWKKHDESLNEKVK 200
BSNT_02409___ 201 HLNERHYAALHYQAEGTDLTIKLPRKHVWAGAGSVNESGHEFMANMPTEE 250
.||||||..|||.|.||||||:||.:|:|.|||||:|.|..|||||||||
BPUM_1341___a 201 ILNERHYHKLHYDAPGTDLTIELPEQHIWVGAGSVSERGVSFMANMPTEE 250
BSNT_02409___ 251 VFTLPQKDGVDGVVSSTKPLSYGGNIIENFTLTFENGRIVDIKAEKGEDI 300
|||:|:||||:|.|||||||||.||||:.||||||||||||:||::||||
BPUM_1341___a 251 VFTVPKKDGVNGTVSSTKPLSYAGNIIDEFTLTFENGRIVDVKAKEGEDI 300
BSNT_02409___ 301 LKELVETDEGSHYLGEVALVPYDSPISQSNILFYNTLFDENASNHLAIGS 350
|..||||||||||||||||||.|||||.||||:||||:||||||||||||
BPUM_1341___a 301 LTSLVETDEGSHYLGEVALVPDDSPISNSNILYYNTLYDENASNHLAIGS 350
BSNT_02409___ 351 AYAFNIEGGKQMSREELVKEGLNESITHVDFMIGSKDMNIDGITADGKRE 400
.|||||||||:|.||||...|:|.||||||||||||:|||||||.|||||
BPUM_1341___a 351 GYAFNIEGGKEMKREELDAAGVNNSITHVDFMIGSKEMNIDGITKDGKRE 400
BSNT_02409___ 401 PIFRNGNWAF 410
|||||||||.
BPUM_1341___a 401 PIFRNGNWAI 410
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