Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02409 and BPUM_1341

See DNA alignment / Visit BSNT_02409 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_02409___ampS.1.24716.seq
#    -bsequence pep-align/BPUM_1341___ampS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02409___ampS-BPUM_1341___ampS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02409___ampS-BPUM_1341___ampS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02409___ampS
# 2: BPUM_1341___ampS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity:     293/410 (71.5%)
# Similarity:   346/410 (84.4%)
# Gaps:           0/410 ( 0.0%)
# Score: 1571.0
# 
#
#=======================================

BSNT_02409___      1 MDSFSQKLNTYAQLAVEVGVNVQKGQYVVVNASTDVRDFVRLIVKHAYEK     50
                     |.||.::|:.||:..|||||||||.|.|||:|||:..|.|||:.|||||:
BPUM_1341___a      1 MSSFEKQLDQYAKTIVEVGVNVQKEQEVVVSASTESADLVRLVAKHAYER     50

BSNT_02409___     51 GAKNVTVNWQDDEVAKLKYELAPFEAFEEYPEWEAKGREELAKNGAAFIS    100
                     |||||.:.|.|..:|:||||.||.:.||::|||||:..|.:||.|.|||:
BPUM_1341___a     51 GAKNVHIRWSDGVLARLKYEHAPQDVFEQFPEWEAQMMETIAKRGGAFIT    100

BSNT_02409___    101 VVSSNPDLLKGIDSKRIAAFQKAAGKALHTYRQYIQSDKVSWTVVGAASA    150
                     ::|.:||||:|||||:|||.|||||.||||||||:|||||:||||||||.
BPUM_1341___a    101 ILSESPDLLRGIDSKKIAAQQKAAGSALHTYRQYVQSDKVAWTVVGAASK    150

BSNT_02409___    151 GWAHKVFPGKSEEEAIHLLWEEIFKATRVNEDNPVQAWINHDQNLHEKVD    200
                     .||.|:||.:::||||.|||::|||..|.::.:||:||..||::|:|||.
BPUM_1341___a    151 DWAKKIFPDQTDEEAIALLWDQIFKVARADQADPVEAWKKHDESLNEKVK    200

BSNT_02409___    201 HLNERHYAALHYQAEGTDLTIKLPRKHVWAGAGSVNESGHEFMANMPTEE    250
                     .||||||..|||.|.||||||:||.:|:|.|||||:|.|..|||||||||
BPUM_1341___a    201 ILNERHYHKLHYDAPGTDLTIELPEQHIWVGAGSVSERGVSFMANMPTEE    250

BSNT_02409___    251 VFTLPQKDGVDGVVSSTKPLSYGGNIIENFTLTFENGRIVDIKAEKGEDI    300
                     |||:|:||||:|.|||||||||.||||:.||||||||||||:||::||||
BPUM_1341___a    251 VFTVPKKDGVNGTVSSTKPLSYAGNIIDEFTLTFENGRIVDVKAKEGEDI    300

BSNT_02409___    301 LKELVETDEGSHYLGEVALVPYDSPISQSNILFYNTLFDENASNHLAIGS    350
                     |..||||||||||||||||||.|||||.||||:||||:||||||||||||
BPUM_1341___a    301 LTSLVETDEGSHYLGEVALVPDDSPISNSNILYYNTLYDENASNHLAIGS    350

BSNT_02409___    351 AYAFNIEGGKQMSREELVKEGLNESITHVDFMIGSKDMNIDGITADGKRE    400
                     .|||||||||:|.||||...|:|.||||||||||||:|||||||.|||||
BPUM_1341___a    351 GYAFNIEGGKEMKREELDAAGVNNSITHVDFMIGSKEMNIDGITKDGKRE    400

BSNT_02409___    401 PIFRNGNWAF    410
                     |||||||||.
BPUM_1341___a    401 PIFRNGNWAI    410


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.