Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02401 and BPUM_1335

See DNA alignment / Visit BSNT_02401 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_02401___fruK.1.24716.seq
#    -bsequence pep-align/BPUM_1335___fruK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02401___fruK-BPUM_1335___fruK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02401___fruK-BPUM_1335___fruK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02401___fruK
# 2: BPUM_1335___fruK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     237/303 (78.2%)
# Similarity:   269/303 (88.8%)
# Gaps:           0/303 ( 0.0%)
# Score: 1230.0
# 
#
#=======================================

BSNT_02401___      1 MIYTVTLNPSVDYIVHVEDFTVGGLNRSSYDTKYPGGKGINVSRLLKRHH     50
                     ||||||||||||||||||||.|||||||:||.|||||||||||||||||.
BPUM_1335___f      1 MIYTVTLNPSVDYIVHVEDFAVGGLNRSTYDKKYPGGKGINVSRLLKRHS     50

BSNT_02401___     51 VASKALGFVGGFTGEYIKTFLREENLETAFSEVKGDTRINVKLKTGDETE    100
                     |.||||||:|||||:||:.||:.|.|:|||.||..|||||||||||:|||
BPUM_1335___f     51 VESKALGFIGGFTGKYIQDFLQNEQLQTAFHEVSEDTRINVKLKTGEETE    100

BSNT_02401___    101 INGQGPTISDEDFKAFLEQFQSLQEGDIVVLAGSIPSSLPHDTYEKIAEA    150
                     |||.||:|::..|.:||.||.||.|||:|||||||||||||:|||:|||.
BPUM_1335___f    101 INGLGPSITEAQFDSFLSQFTSLIEGDVVVLAGSIPSSLPHNTYERIAEV    150

BSNT_02401___    151 CKQQNARVVLDISGEALLKATEMKPFLMKPNHHELGEMFGTAITSVEEAV    200
                     |::|..|||||||||||.||..:||||||||||||||||.|:|::.|||:
BPUM_1335___f    151 CEKQGVRVVLDISGEALKKAAGLKPFLMKPNHHELGEMFETSISTAEEAI    200

BSNT_02401___    201 PYGKKLVEQGAEHVIVSMAGDGALLFTNEAVYFANVPKGKLVNSVGAGDS    250
                     ||||||:|||||||||||||||||||:.|.:|.:|||||.||||||||||
BPUM_1335___f    201 PYGKKLLEQGAEHVIVSMAGDGALLFSKEGIYQSNVPKGTLVNSVGAGDS    250

BSNT_02401___    251 VVAGFLAGISKQLPLEEAFRLGVTSGSATAFSEELGTEEFVQQLLPEVKV    300
                     ||||||||:||.|.:||:|:|||||||||||||||||:|.|..|||:|||
BPUM_1335___f    251 VVAGFLAGVSKGLSIEESFKLGVTSGSATAFSEELGTKELVDTLLPQVKV    300

BSNT_02401___    301 TRL    303
                     ||:
BPUM_1335___f    301 TRI    303


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