Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02354 and BPUM_1303

See DNA alignment / Visit BSNT_02354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02354___ykuF.1.24716.seq
#    -bsequence pep-align/BPUM_1303___ykuF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02354___ykuF-BPUM_1303___ykuF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02354___ykuF-BPUM_1303___ykuF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02354___ykuF
# 2: BPUM_1303___ykuF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     181/254 (71.3%)
# Similarity:   209/254 (82.3%)
# Gaps:           0/254 ( 0.0%)
# Score: 948.0
# 
#
#=======================================

BSNT_02354___      1 MEKKAVIITGGSSGMGKAMAKKQAELGWHVMVTGRNHEALEETKKEIQTF     50
                     |.|:.||:||||||||||||...|..||:|::|||..|.||:...||:..
BPUM_1303___y      1 MTKQTVIVTGGSSGMGKAMAVHLAHEGWNVVITGRTEETLEKVANEIKQN     50

BSNT_02354___     51 EGQVACFQMDVRSDSAASDMIKEAVKAFGRLDALINNAAGNFICPAEKLT    100
                     .|.:|.||||||:...|..|:|.||..||.:|||||||||||:.|||||:
BPUM_1303___y     51 GGSIAYFQMDVRNPEDADQMVKFAVDTFGDVDALINNAAGNFLVPAEKLS    100

BSNT_02354___    101 PNGWKAVIEIVLNGTFFCSQAAARHWIDQKQQGVILNMAATYAWGAGAGV    150
                     ||||||||:||||||||||.|...:||.||::|.::||.||||||||.||
BPUM_1303___y    101 PNGWKAVIDIVLNGTFFCSHAVGNYWIRQKKRGSMVNMVATYAWGAGVGV    150

BSNT_02354___    151 VHSAAAKAGVLSLTRTLAVEWGSKYGIRTNAIAPGPIERTGGAEKLFESE    200
                     .|||||||||||||||||||||.:|.||.||||||||||||||:||:|||
BPUM_1303___y    151 AHSAAAKAGVLSLTRTLAVEWGKQYRIRVNAIAPGPIERTGGADKLWESE    200

BSNT_02354___    201 KAMARTMNSVPLGRLGTPEEIAALAAFLLSDEASYINGDCITMDGGQWLN    250
                     :|..||::||||||||||||||.||:||||::||||||||||||||||||
BPUM_1303___y    201 EAAQRTLDSVPLGRLGTPEEIAELASFLLSEQASYINGDCITMDGGQWLN    250

BSNT_02354___    251 PYPF    254
                     ..||
BPUM_1303___y    251 QSPF    254


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