Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02347 and BPUM_1296

See DNA alignment / Visit BSNT_02347 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence pep-align/BSNT_02347___cheV.1.24716.seq
#    -bsequence pep-align/BPUM_1296___cheV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02347___cheV-BPUM_1296___cheV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02347___cheV-BPUM_1296___cheV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02347___cheV
# 2: BPUM_1296___cheV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     219/303 (72.3%)
# Similarity:   255/303 (84.2%)
# Gaps:          10/303 ( 3.3%)
# Score: 1146.0
# 
#
#=======================================

BSNT_02347___      1 ---------MDSGTNELEIVKFGVGENAFGINVMKVREIIQPVEVTSVPH     41
                              :||||||||||||.:|.|.||||||||||||||||||.|||
BPUM_1296___c      1 MALNKQEILLDSGTNELEIVKFEIGSNQFGINVMKVREIIQPVEVTVVPH     50

BSNT_02347___     42 SHQHVEGMIKLRGEILPVISLFSFFGVEPEGSKDEKYIVTEFNKRKIVFH     91
                     |||.|||||.|||||||||:|||||.||.:.|:.|||||||||:||.|||
BPUM_1296___c     51 SHQDVEGMISLRGEILPVINLFSFFNVESDQSEQEKYIVTEFNQRKFVFH    100

BSNT_02347___     92 VGSVSQIHRVSWEAIEKPTSLNQGMERHLTGIIKLEDLMIFLPDYEKIIY    141
                     .|:||||||||||.|||||:|||||:|||||||||::.||||||||||||
BPUM_1296___c    101 TGTVSQIHRVSWEEIEKPTALNQGMDRHLTGIIKLDEKMIFLPDYEKIIY    150

BSNT_02347___    142 DIESDSGVDTYNMHTEGFDERRTDKKLIIVEDSPLLMRLLQDELKEAGYN    191
                     ||||.|||:||:|.....|||||.|||.:|||||||||||.:||.||||.
BPUM_1296___c    151 DIESASGVETYHMFDGEKDERRTGKKLYVVEDSPLLMRLLTNELTEAGYK    200

BSNT_02347___    192 NIASFENGKEAYEYIMNLAENETDLSEQIDMIITDIEMPKMDGHRLTKLL    241
                     ||.:||:||:||:::|:|......::|:||||||||||||||||||||||
BPUM_1296___c    201 NIVTFEDGKQAYDHVMDLVSKGITVTEEIDMIITDIEMPKMDGHRLTKLL    250

BSNT_02347___    242 KENPKSSDVPVMIFSSLITDDLRHRGEVVGADEQISKPEISDLIKKVDTY    291
                     ||||.:|.:|::|||||||:||||:||.:|||:|||||||..||:|||.:
BPUM_1296___c    251 KENPLTSSIPILIFSSLITEDLRHKGETIGADDQISKPEIHQLIEKVDHF    300

BSNT_02347___    292 VIE    294
                     :| 
BPUM_1296___c    301 II-    302


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