Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00481 and BPUM_1294
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:18
# Commandline: needle
# -asequence pep-align/BSNT_00481___yczC.1.24716.seq
# -bsequence pep-align/BPUM_1294.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00481___yczC-BPUM_1294.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00481___yczC-BPUM_1294.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00481___yczC
# 2: BPUM_1294
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 48/181 (26.5%)
# Similarity: 72/181 (39.8%)
# Gaps: 56/181 (30.9%)
# Score: 146.0
#
#
#=======================================
BSNT_00481___ 1 ---------------MELAGFMLRACALLLDVIIAAA------VILAAGF 29
.||||...|..|.|||.||... .|||..|
BPUM_1294 1 METNITEPHIQEKKHPELAGVGYRFLAHLLDGIIIGVPYSFIMFILATLF 50
BSNT_00481___ 30 TFGDGSA--------------------------------GVIIVAILMLI 47
......| |.|:|.|::..
BPUM_1294 51 FVSSPEAAMMMDDDSYYYSTTVMTDEDWAVIMGLIFFYIGAILVGIVVTW 100
BSNT_00481___ 48 VYPLLMPLTNWKGTLGKKIIGLQIVRDETYKKISFPQAIVRYLI-AWVHV 96
:|..:|..:..:|||||..:|:::.| .|.:|::|.:|..|:.. .::..
BPUM_1294 101 LYYAIMESSKLQGTLGKMALGIKVTR-VTGEKVTFGRATGRFFAKGFLSP 149
BSNT_00481___ 97 FSRLIYLTAAFTKKKQTVHDMAAKTIVLKAE 127
...:.|:.|.||:|||.:||:.|.|||:|.
BPUM_1294 150 ILYIGYIIAFFTEKKQALHDLIASTIVVKK- 179
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