Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00481 and BPUM_1294

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence pep-align/BSNT_00481___yczC.1.24716.seq
#    -bsequence pep-align/BPUM_1294.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00481___yczC-BPUM_1294.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00481___yczC-BPUM_1294.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00481___yczC
# 2: BPUM_1294
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:      48/181 (26.5%)
# Similarity:    72/181 (39.8%)
# Gaps:          56/181 (30.9%)
# Score: 146.0
# 
#
#=======================================

BSNT_00481___      1 ---------------MELAGFMLRACALLLDVIIAAA------VILAAGF     29
                                    .||||...|..|.|||.||...      .|||..|
BPUM_1294          1 METNITEPHIQEKKHPELAGVGYRFLAHLLDGIIIGVPYSFIMFILATLF     50

BSNT_00481___     30 TFGDGSA--------------------------------GVIIVAILMLI     47
                     ......|                                |.|:|.|::..
BPUM_1294         51 FVSSPEAAMMMDDDSYYYSTTVMTDEDWAVIMGLIFFYIGAILVGIVVTW    100

BSNT_00481___     48 VYPLLMPLTNWKGTLGKKIIGLQIVRDETYKKISFPQAIVRYLI-AWVHV     96
                     :|..:|..:..:|||||..:|:::.| .|.:|::|.:|..|:.. .::..
BPUM_1294        101 LYYAIMESSKLQGTLGKMALGIKVTR-VTGEKVTFGRATGRFFAKGFLSP    149

BSNT_00481___     97 FSRLIYLTAAFTKKKQTVHDMAAKTIVLKAE    127
                     ...:.|:.|.||:|||.:||:.|.|||:|. 
BPUM_1294        150 ILYIGYIIAFFTEKKQALHDLIASTIVVKK-    179


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