Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02328 and BPUM_1278

See DNA alignment / Visit BSNT_02328 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence pep-align/BSNT_02328___glcT.1.24716.seq
#    -bsequence pep-align/BPUM_1278___glcT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02328___glcT-BPUM_1278___glcT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02328___glcT-BPUM_1278___glcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02328___glcT
# 2: BPUM_1278___glcT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     195/290 (67.2%)
# Similarity:   244/290 (84.1%)
# Gaps:           8/290 ( 2.8%)
# Score: 1056.5
# 
#
#=======================================

BSNT_02328___      1 MTKELRIVNGSFTVKKVLNNNVLIASHHKYSEVVLIGKGIGFGKKQDDVI     50
                           :...||||.|.|||||:||.|....||||||||||||||..||:
BPUM_1278___g      1 ------MFMESFTVDKALNNNVIIARHPSLGEVVLIGKGIGFGKKSGDVL     44

BSNT_02328___     51 EDKGYDKMFILKDEKEQKQFKKLLDYVDEKLVDISNDVIYHIRNRTNHSL    100
                     :...::|||:||:.|||.::|:||.::||.:::::||||||||.:..|.|
BPUM_1278___g     45 DQDTFEKMFVLKNTKEQTEYKQLLHHIDENMIELANDVIYHIREKMGHRL     94

BSNT_02328___    101 NEHIHIALTDHIAFAIKRQQQGFDMKNPFLMETQSLYPEEYQIAKEVIDM    150
                     ||||||||||||||:.||.|||:|:.|||::||:||||:||::||||:::
BPUM_1278___g     95 NEHIHIALTDHIAFSFKRVQQGYDITNPFMLETKSLYPKEYEVAKEVVEL    144

BSNT_02328___    151 INEKAGI--CLPEGEIGFIALHIHSALTNRPLSEVNQHSQLMAQLVEVIE    198
                     ||::..:  .||||||||||||||||||||||||||:||||:.|:|:|||
BPUM_1278___g    145 INKRPDVKTKLPEGEIGFIALHIHSALTNRPLSEVNRHSQLITQMVQVIE    194

BSNT_02328___    199 DSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLMLLLKNEYPL    248
                     |||.|||::||::||||:|||.|:|||||:||..:|||||:.||||||||
BPUM_1278___g    195 DSFHMKVDRESIHYLRLLRHITFSIERIKREESLEEPEKLLHLLKNEYPL    244

BSNT_02328___    249 CYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS    288
                     |||||||:|||||..|||||.:||||||||||||||||||
BPUM_1278___g    245 CYNTAWKMIKILQHALKKPVQDAEAVYLTLHLYRLTNKIS    284


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