Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02326 and BPUM_1277

See DNA alignment / Visit BSNT_02326 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence pep-align/BSNT_02326___ykvZ.1.24716.seq
#    -bsequence pep-align/BPUM_1277.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02326___ykvZ-BPUM_1277.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02326___ykvZ-BPUM_1277.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02326___ykvZ
# 2: BPUM_1277
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     164/342 (48.0%)
# Similarity:   235/342 (68.7%)
# Gaps:          21/342 ( 6.1%)
# Score: 874.5
# 
#
#=======================================

BSNT_02326___      1 MANIKDIAEKAGVSVTTVSRVINNHPYVSEDKRKRVFEAMESLEYTRNIH     50
                     ||||::||::|||||||||||:|:||||.|:||:||.:||:.|:|||||.
BPUM_1277          1 MANIREIAKRAGVSVTTVSRVLNHHPYVKEEKRERVLDAMKELKYTRNIQ     50

BSNT_02326___     51 AVHLSKGFSNMIGVVLPTVNLPYFAELIAGIADAAAESGVHLSLFQTNYE    100
                     ||||:||:|||:|:||||::..||:.|:.|||:.|...|:|.|||||.|:
BPUM_1277         51 AVHLAKGYSNMLGIVLPTIDHSYFSRLVTGIAEKAQARGMHFSLFQTGYD    100

BSNT_02326___    101 VQKEIFALSQLKQRQVDGLIFCSKALADEKLMEWE--GPILLCQNSDNAR    148
                     ..||..||..||:|:||||||||.||:|..:..|:  |||:.|....:..
BPUM_1277        101 PLKEKEALMSLKERRVDGLIFCSNALSDRDISRWQEFGPIIFCHPVPSEN    150

BSNT_02326___    149 FPTISIPHQEAFRNGLDYLIAKGHKKIAICLARKKGMNSHFRIKAYKEAL    198
                     ..|:||.|.:||:.||.:|.|.||::|||.|||.:|.||..|::||:..:
BPUM_1277        151 CSTVSIAHDQAFKEGLHHLAACGHQRIAIVLARIEGTNSQSRLQAYQNMM    200

BSNT_02326___    199 EEIGEAFREDWVIEKAITINDGKALFHKWKTWKEKPTAIFVANDQVSAGL    248
                     ..:|:...|:|:||..:|:.|||.||.:|:..|.:|||:|:.||.||||.
BPUM_1277        201 RSLGQEIDEEWIIEGKLTLFDGKQLFAEWQKMKNRPTALFITNDDVSAGF    250

BSNT_02326___    249 FLEAKNQRVSVPDELAILSVDNHEISQALGITTIDIQTREMGKQAFAILE    298
                     .|||:...:.|.:..|||...|.::|:||.|::|||..:.||::||.:.:
BPUM_1277        251 LLEAQRHDIKVGESPAILGFQNDQLSEALRISSIDIPLKRMGQEAFDLFD    300

BSNT_02326___    299 KRIQGQPIERKVLDYRLIERSTV-------------------    321
                     :.|:|:..|:::|.:|||||||.                   
BPUM_1277        301 QAIKGEAPEKRMLPFRLIERSTTVFKNNSLTHVSSVLYDKRD    342


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